Gene Information

Name : qseB (RPSI07_0038)
Accession : YP_003750744.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 44098 - 44763 bp
Length : 666 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type r : regulator

DNA sequence : 
ATGCGAGTCCTGCTGATCGAAGACGACCCGATGATCGGCGCGGCGGTGGAAGCCGCGCTGCGCGACGCCGCCTATGCAGT
GGACTGGGTGCGCGATGGCCAGACCGCCATCGACGTGACCGGGCACCAGCACTACGACGTGCTGCTGCTCGACCTCGGCC
TGCCGGGCCAGGACGGCCACGCGGTACTGCGCACGCTGCGCGCGCGGGGCAACCCGGTGCCGGTGCTGATCCTCACCGCG
CGCGATGCGGTGGGCGAGCGCGTGCGCGGCCTGGACGGCGGCGCCGACGACTACGTGCTCAAACCCTTCGAAATGGTGGA
ACTGCTGGCACGCATGCGCGCGGTGCTGCGCCGCCGGGGCGGGGCCGCCAGCCCGGTGCTGAGCAACGGCGTGCTGTCGC
TCGACCCGGCCACGCACGAGGTGCGCGCGGGCGACGGCGAGCCGGTGCGCCTGTCGGGCCGCGAGTTCGCGCTGCTGCAG
GCGCTGATGCTGCGGCCCGGCGCCATCCTGTCGCGCAGCGAGCTGGAGGAGCGCATCTACGGCTGGGGCCACGAGGTGGC
CAGCAACGCGGTCGAGTTCCTCATCCACGCGCTGCGCAAGAAGCTGGGGGCGGATTCGATCAAAAACGTCAGGGGCGTGG
GATGGATGGTGTCCAAGGGGCGGTGA

Protein sequence : 
MRVLLIEDDPMIGAAVEAALRDAAYAVDWVRDGQTAIDVTGHQHYDVLLLDLGLPGQDGHAVLRTLRARGNPVPVLILTA
RDAVGERVRGLDGGADDYVLKPFEMVELLARMRAVLRRRGGAASPVLSNGVLSLDPATHEVRAGDGEPVRLSGREFALLQ
ALMLRPGAILSRSELEERIYGWGHEVASNAVEFLIHALRKKLGADSIKNVRGVGWMVSKGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-24 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003750744.1 Transcriptional regulatory protein BAC0197 Protein 3e-25 43
qseB YP_003750744.1 Transcriptional regulatory protein BAC0487 Protein 5e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003750744.1 Transcriptional regulatory protein VFG0473 Protein 3e-27 42