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Name : ldhA (RPSI07_0354) Accession : YP_003751041.1 Strain : Ralstonia solanacearum PSI07 Genome accession: NC_014311 Putative virulence/resistance : Resistance Product : fermentative D-lactate dehydrogenase, NAD-dependent Function : - COG functional category : C : Energy production and conversion COG ID : COG1052 EC number : 1.1.1.28 Position : 342380 - 343366 bp Length : 987 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 4297266, 9025293; Product type e : enzyme DNA sequence : ATGCGCATCCTCTTCTTCAGCAGCCACCGTTACGACGAAGACAGCTTCCGCGCCGCGCAGGCGCGCAGCGGCCACGGCTT CGAACTGGTCTTCCAGCGCGCCCACCTGGACGTGCACACCGCGCCGCTGGCCGCCAGCTTCGAGGTGGTCTGCCCGTTCG TCAACGACTGCCTCGATGCCGACGTGCTCGCCGTGCTGGCCGCCGGCGGCACCCGGCTGATCGCGCTGCGCTCGGCTGGC TTCAACCATGTCGACCTGGCCGCGGCACAGCGGCTGGGGCTGACGGTGGCGCGGGTGCCGGCGTATTCGCCGCATGCGGT GGCCGAGCACGCGGTCGGCATGATCCTCACGCTCAACCGGCGCCTGCACCGCGCCTGCAACCGCACCCGCGAGGGCGACT TCTCGCTCGACGGGCTGCTCGGCTTCGACCTGGCCGGCAAGACCGTCGGCGTGGTCGGCACCGGGCAGATCGGGCAGGTG TTCGCGCGCATCATGGCCGGCTTCGGCTGCCGGCTGCTGGCGTTTGATCCGTTTCCGCAGGCGGCACTGGGCGTGACCTA CGTGCCGCTGCCGACTTTGCTGGCGCAGTCCGACATCGTCAGCCTGCACTGCCCGCTCAATGCCGACACGCACCACCTGA TCGACGCCCGCGCGCTCGCCAGCATGAAGATGGGCGCCATGCTGATCAACACCAGCCGCGGCGGGCTGATCGACAGCCCC GCGCTGATCGACGCGCTCAAATCCGGCCAGCTTGGCCACCTCGGGCTGGACGTCTATGAGGAAGAGGCCGACCTGTTCTT CGAAGACCGCTCCGCCGACGTGCTGCAGGACGACGTGCTGGCGCGCCTGCTGACCTTTCCCAACGTCATCGTGACCGCGC ACCAGGCGTTCTTCACGCGCGAGGCGCTGGCGGGCATCGCCGACACCACGCTCGCCAACGCGGCGGCATGGGCAGCCGGC GCGCCCGCGAATGTGGTGAACGCTTAA Protein sequence : MRILFFSSHRYDEDSFRAAQARSGHGFELVFQRAHLDVHTAPLAASFEVVCPFVNDCLDADVLAVLAAGGTRLIALRSAG FNHVDLAAAQRLGLTVARVPAYSPHAVAEHAVGMILTLNRRLHRACNRTREGDFSLDGLLGFDLAGKTVGVVGTGQIGQV FARIMAGFGCRLLAFDPFPQAALGVTYVPLPTLLAQSDIVSLHCPLNADTHHLIDARALASMKMGAMLINTSRGGLIDSP ALIDALKSGQLGHLGLDVYEEEADLFFEDRSADVLQDDVLARLLTFPNVIVTAHQAFFTREALAGIADTTLANAAAWAAG APANVVNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2295 | NP_815952.1 | D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 1e-31 | 46 |
| vanHB | YP_008394258.1 | VanH protein, D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 5e-31 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ldhA | YP_003751041.1 | fermentative D-lactate dehydrogenase, NAD-dependent | U35369.1.gene5.p01 | Protein | 2e-31 | 45 |
| ldhA | YP_003751041.1 | fermentative D-lactate dehydrogenase, NAD-dependent | AF310956.2.orf4.gene | Protein | 2e-31 | 45 |
| ldhA | YP_003751041.1 | fermentative D-lactate dehydrogenase, NAD-dependent | NC_005054.2598279.p0 | Protein | 7e-31 | 44 |
| ldhA | YP_003751041.1 | fermentative D-lactate dehydrogenase, NAD-dependent | NC_014475.1.orf2.gen | Protein | 7e-31 | 44 |
| ldhA | YP_003751041.1 | fermentative D-lactate dehydrogenase, NAD-dependent | AF155139.2.orf4.gene | Protein | 2e-29 | 43 |
