Gene Information

Name : tISRso14b (RPSI07_3375)
Accession : YP_003753983.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Unknown
Product : ISRSO14-transposase orfB protein (tISRso14b)
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3512159 - 3512986 bp
Length : 828 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence : 
GTGGCGATTCGGCAGAAGGTCAACATCTCCGAGCGCCGCGCCTGCCGGCTTGTCGGGCTGTCCCGCAGCGTGCTGCACTA
TGAAGCTCAAGGTGACCCAGGTAATGAGGGACTCAAAGCGCGGCTGGTTGAGCTGGCGCATGAGCGTCGGCGCTTTGGCT
ACCGGCGACTGCACGTCCTGCTGGAACGCGAGGGCATCCATGCGAATCACAAACGCGTACACCGGCTGTACCGTGAGGCT
GGCTTGGCTGTACGGCGCAGACGGCGACGCCACGGGGTGATGGTGGAGCGCGAGCCACTGGCTCTGCCGGCTGCGCCGAA
CGAGGTCCGGTCGATTGATTTCGTGATGGACGCGCTATCCAACGGACGTCGCCTGAAGTGCCTGACCATCGTTGATGACT
TCACGAAGGAGGCGGTCGACATCGTCGTGGAGCACAGCATCTCAGGCTTGTATGTGGCACGAGCGCTGGACCATGCGGCG
CGCTTCAGGGGCTATCCCAAAGCACTACGCACGGACCAGGGGCCGGAGTTCACGAGCCGAGCACTGGACCAGTGGGCCTA
CGCCAACGGCGTGTCCCTGAAATTGATTCAGGCCGGCAAACCGACGCAGAATGCCTACATCGAGTCGTTCAACGGCAAGT
TCCGTGACGAATGCTTGAACGAGCACTGGTTCACGAGCCTCGCCCATGCACGCGCTGTCATCGCAGCCTGGCGTCAGGAT
TACAACGAGACACGGCCGCACAGCGCCTTGAATTACCAACTGCCAGCAGAATTCGCAGCGCGGTATCGAGCAGCAGCGGT
AGCTCCTGCCGTCCAGGAGCAAACCTGA

Protein sequence : 
MAIRQKVNISERRACRLVGLSRSVLHYEAQGDPGNEGLKARLVELAHERRRFGYRRLHVLLEREGIHANHKRVHRLYREA
GLAVRRRRRRHGVMVEREPLALPAAPNEVRSIDFVMDALSNGRRLKCLTIVDDFTKEAVDIVVEHSISGLYVARALDHAA
RFRGYPKALRTDQGPEFTSRALDQWAYANGVSLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTSLAHARAVIAAWRQD
YNETRPHSALNYQLPAEFAARYRAAAVAPAVQEQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-86 72
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-45 47
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 4e-40 44