|
Name : gabD (RPSI07_3351) Accession : YP_003753959.1 Strain : Ralstonia solanacearum PSI07 Genome accession: NC_014311 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I, NADP-dependent Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 3483533 - 3485026 bp Length : 1494 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8297211; Product type e : enzyme DNA sequence : ATGACCCGCACCGATCTGCCGCCCGCACCGATCGCCCTGAACGACCCGGCGCTGTGGCGCACGCAAGCCTTCCTGGCCGG CACCTGGGCCGACGCCGATGACGACGCCACGCGCGACGTGACCGACCCCGCCACCGGCCGCAAGATCGGCACGGTGCCCG CGATGGGCGCCGCCGAGACGCGCCGCGCCATCGAAGCCGCGCAGATCGCGCAGCGCGCCTGGCGCAAGGTGACCGCGCGC GAGCGCGCCCGCATCCTGCGCAAGCTGGCCGACCTGATGATGGAACACCAGCAGGACCTGGCCCGCATCCTGACCGCCGA GCAAGGTAAGCCGCTACCCGAGGCCGCCGGCGAGATCGCCTACGCCGCATCGTTCATCGAATGGTTTGCCGAGGAGGCCC GCCGTGTCTACGGCGATACCATTCCCGCGCCGCAGGGCGATCGCCGCATCGTCGTCAACAAGGAGCCGATCGGCGTGACG GCGGCGATCACGCCGTGGAACTTCCCCATCGCCATGATGACGCGCAAGGTCGGCCCGGCGCTGGCGGCCGGCTGTTCGAT GGTGGTCAAGCCCGCGCTGGAGACGCCGTACTCCGCGCTGGCGTTCGCGGAGCTGGCCGCGCGCGCGGGGGTGCCGGCCG GGCTGCTGTCCGTCGTCACCGGCGACGCGCAGGGCATCGGCGGCGAACTGACCACCAACCCCGTCGTGCGCAAGCTGAGC TTCACCGGCTCCACGGCCATCGGCCGCCTGCTGATGCGCCAATGCGCCGACGACGTGAAGAAGCTGTCGCTCGAGCTGGG CGGCAACGCGCCCTTCATCGTGTTCGACGATGCCGATCTCGATGCCGCCGTGGAAGGCGCGATGGTGGCCAAGTACCGCA ACGCCGGCCAGACCTGCGTGTGCGCCAACCGCTTCTACGTGCAGCGCGGCATCTATGACGCCTTCGCCGCCAGGCTGACC GAGGCCGTGCGCGCGCTGCGCGTGGGCAACGGCACCGAGCCGGGCGTGCAGCAGGGTCCGCTGATCCACCGGCGCGCGAT GGACAAGGTGCGCGCCCACGTGGACGACGCCGTCGCGCAGGGCGCCCGCGTGCTCGTCGGCGGCAAGCCGCATACGCTGT CGGCCCAGGGCGGGGCATTCTTCGAGCCGACCGTCATCGCCGATGCCAGGATCGGCATGCTGGTCGCGCACGAGGAGACC TTCGGCCCGCTGGCCGCGCTGATCCCGTTCGACACGGAAGACGAAGCCGTGGCCGCGGCCAACGACACCGAGTTCGGCTT GGCCGCCTATTTCTACACGCGCGACCTGGGCCGCGCGTGGCGCGTGTCGGAGGCGCTGGAGAGCGGCATGGTCGGCGTCA ACACCGGACTGATCTCGACGGCCGAGGCGCCGTTCGGCGGCGTCAAGCAATCGGGCCTGGGCCGCGAAGGCTCCAAGTAC GGCATCGACGAGTACCTGGAGATCAAGTACGTCTGCATGGCGGGGCTCGGCTGA Protein sequence : MTRTDLPPAPIALNDPALWRTQAFLAGTWADADDDATRDVTDPATGRKIGTVPAMGAAETRRAIEAAQIAQRAWRKVTAR ERARILRKLADLMMEHQQDLARILTAEQGKPLPEAAGEIAYAASFIEWFAEEARRVYGDTIPAPQGDRRIVVNKEPIGVT AAITPWNFPIAMMTRKVGPALAAGCSMVVKPALETPYSALAFAELAARAGVPAGLLSVVTGDAQGIGGELTTNPVVRKLS FTGSTAIGRLLMRQCADDVKKLSLELGGNAPFIVFDDADLDAAVEGAMVAKYRNAGQTCVCANRFYVQRGIYDAFAARLT EAVRALRVGNGTEPGVQQGPLIHRRAMDKVRAHVDDAVAQGARVLVGGKPHTLSAQGGAFFEPTVIADARIGMLVAHEET FGPLAALIPFDTEDEAVAAANDTEFGLAAYFYTRDLGRAWRVSEALESGMVGVNTGLISTAEAPFGGVKQSGLGREGSKY GIDEYLEIKYVCMAGLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-139 | 67 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-75 | 41 |
