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Name : thiC (RPSI07_3270) Accession : YP_003753878.1 Strain : Ralstonia solanacearum PSI07 Genome accession: NC_014311 Putative virulence/resistance : Unknown Product : thiamin (pyrimidine moiety) biosynthesis protein Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3400159 - 3402054 bp Length : 1896 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9371431; Product type f : factor DNA sequence : ATGCCCCAAGCCAAAAACGCCCCCGCCGCCTCGTTCGACTCGCTGCAAACCGAGCTCGACCAGAAATTCGCCTATCCGGC CTCCAGCAAGACCTATATCGCCGGCAGCCGCGCGGACCTCCGCGTGCCGATGCGCACCATCAAGCAGACCGCCACGCGCA CCGACCAGGGCGAGATGCTGAACCCGCCGATTCCCGTGTACGACACCTCGGGCCCGTACTCCGACCCCGACGTGCACATC GACCTGAAGGCGGGCCTGGCCCCGCTGCGCGCCAAGTGGATCGACGAACGCGGCGATACGGAAATCCTCTCCGGCCTGTC GTCCGAATATGGCCGCGTGCGCGCGGGTGACCCAGCCACCGCGCACCTGCGCTTTGCCCACGTCGCCAATCCGCGCCGCG CCAAGGCCGGCGCCAACGTGAGCCAGATGCACTACGCGCGTCGCGGCATCATCACGCCGGAAATGGAATACGTGGCGCTG CGCGAGTCGCTCAACCTGCAGGCACTGCAAGGCAAGCCGGAATACCGCCAACTGCTCAGGCAGCATCCGGGCTTCTCGTA CGGTGCCAACCTGCCGCAGCGCCCGGAAGACATCACGCCGGAATTCGTGCGCCAGGAAGTGGCCGCCGGCCGCGCCATCA TCCCGGCCAACATCAACCACACCGAGCTGGAGCCGATGGCCATCGGCCGCAACTTCCGCGTGAAGATCAACGGCAACCTG GGCAACTCGGCGGTTACCTCGTCGCTGGCCGAGGAAGTCGAAAAGATGGTGTGGGCGATCCGCTGGGGCGCCGACACCAT CATGGACCTGTCCACTGGCAAGCACATCCACGAGACGCGCGAATGGATCCTGCGCAACTCGCCGGTGCCCATCGGCACGG TGCCGATCTACCAGGCGCTGGACAAGACCGGCGGCGTGGCCGAAGACCTGACGTGGGAGATGTTCCGCGACACGCTGATC GAGCAGGCCGAGCAGGGCGTCGACTACTTCACCATCCACGCCGGCGTGCTGCTGCGCTATGTGCCGCTGACCGCCGACCG CGTGACGGGCATCGTCTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTGGCGCATCACAAGGAAAACTTCCTGTACA CGCACTTCGACGAGATCTGCGAAATCATGAAGGCGTACGACGTGTCGTTCAGCCTGGGCGATGGCCTGCGCCCGGGTTGC ATTGCCGACTCGAACGACGCCGCGCAGTTCGGCGAGCTGCACACGCTGGGCGAGCTGACCAAGAAGGCGTGGGAGCACGA CGTACAGGTGATGATCGAAGGCCCGGGCCACGTGCCGCTGCAGCGCGTGCAGGCCAACATGGACGAAGAACTGAAGCACT GCTTCGAGGCCCCGTTCTACACGCTTGGGCCCCTGGTGACCGACATCGCTCCGGGCTACGACCACATCACCAGCGGCATC GGCGCGGCCAACATCGGCTGGTACGGCACGGCCATGCTGTGCTACGTCACGCCCAAGGAACACCTGGGCCTGCCGGACAA GGAAGACGTGCGCGAGGGCATCATCACCTACAAGATCGCCGCGCATGCAGCGGATCTGGCGAAGGGCTGGCCGGGCGCGC AGCTGCGCGACAACGCGCTGTCGAAGGCACGCTTCGAGTTCCGCTGGGAAGACCAGTTCAACCTCGGCCTCGACCCCGAG AAGGCGCGCGCCTTCCACGACGAGACGCTGCCGGCCGAAGGCGCCAAGATTGCCCACTTCTGCTCGATGTGCGGCCCGAA GTTCTGCTCGATGAAAATCACGCAGGAAGTGCGCGACTACGCGGCCTCGCTCGGCTCCAACGCCACCGCCGCAGTACAGG GCATGGAAGAAAAGTCGATCGAGTTCCGCAAGAGCGGCGCGAAGATCTACAGCTAA Protein sequence : MPQAKNAPAASFDSLQTELDQKFAYPASSKTYIAGSRADLRVPMRTIKQTATRTDQGEMLNPPIPVYDTSGPYSDPDVHI DLKAGLAPLRAKWIDERGDTEILSGLSSEYGRVRAGDPATAHLRFAHVANPRRAKAGANVSQMHYARRGIITPEMEYVAL RESLNLQALQGKPEYRQLLRQHPGFSYGANLPQRPEDITPEFVRQEVAAGRAIIPANINHTELEPMAIGRNFRVKINGNL GNSAVTSSLAEEVEKMVWAIRWGADTIMDLSTGKHIHETREWILRNSPVPIGTVPIYQALDKTGGVAEDLTWEMFRDTLI EQAEQGVDYFTIHAGVLLRYVPLTADRVTGIVSRGGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGC IADSNDAAQFGELHTLGELTKKAWEHDVQVMIEGPGHVPLQRVQANMDEELKHCFEAPFYTLGPLVTDIAPGYDHITSGI GAANIGWYGTAMLCYVTPKEHLGLPDKEDVREGIITYKIAAHAADLAKGWPGAQLRDNALSKARFEFRWEDQFNLGLDPE KARAFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYAASLGSNATAAVQGMEEKSIEFRKSGAKIYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 79 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 73 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 73 |
