Gene Information

Name : RPSI07_2806 (RPSI07_2806)
Accession : YP_003753430.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Virulence
Product : putative response regulator, CheY family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2934221 - 2934919 bp
Length : 699 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator

DNA sequence : 
ATGCGCATCCTGATTGCTGAAGACGACGCCACCCTGGCCGACGGGCTGACCCGTTCGCTGCGCCAGGCCGGCTATGCCGT
CGACCAGGCCGCCGACGGCGCCGCTGCCGACGCGGCCCTTTCCGCGCAGACCGCGCAGACCTACGACCTGCTGATCCTCG
ATGTCGGGCTGCCGCGCCTGTCCGGCCTGGAGGTGCTCAAGCGCCTGCGTTCGCGCGGGGCAATGCTGCCGGTGCTGATC
CTGACCGCCGCCGACAGTGTGGACGAGCGCGTCAAGGGTCTCGACCTGGGCGCCGACGACTACATGGCCAAGCCCTTCGC
GCTGTCCGAGCTGGAGGCGCGCGTGCGGGCGCTGGTGCGGCGCGGCACGGGAGGCGGTGCCACGCTGGTCCGCCATGGGC
CGCTGGCCTTCGACCAGGTCGGGCGCATCGCCTACATCCGTGACCAGGTGGTGGACCTGTCGGCACGGGAGATCGGGCTG
CTGGAGATTCTGCTGTCGCGCGCCGGCCGACTGGTGTCGAAGGAACAGTTGGTCGACCACCTGTGTGGCTGGGGCGAGGA
GGTCAGCAACAACGCGATCGAGGTCTACGTGCACCGGCTGCGCAAGAAGATCGAGGTGGACGGCATCCGCATTGCCACCG
TACGCGGGCTCGGCTACTGCCTGGAACGCGTGACCGTACCGGCCGCCGTCCATGGGTGA

Protein sequence : 
MRILIAEDDATLADGLTRSLRQAGYAVDQAADGAAADAALSAQTAQTYDLLILDVGLPRLSGLEVLKRLRSRGAMLPVLI
LTAADSVDERVKGLDLGADDYMAKPFALSELEARVRALVRRGTGGGATLVRHGPLAFDQVGRIAYIRDQVVDLSAREIGL
LEILLSRAGRLVSKEQLVDHLCGWGEEVSNNAIEVYVHRLRKKIEVDGIRIATVRGLGYCLERVTVPAAVHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-34 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPSI07_2806 YP_003753430.1 putative response regulator, CheY family BAC0083 Protein 4e-30 49
RPSI07_2806 YP_003753430.1 putative response regulator, CheY family BAC0638 Protein 6e-25 47
RPSI07_2806 YP_003753430.1 putative response regulator, CheY family NC_002516.2.879194.p Protein 1e-27 46
RPSI07_2806 YP_003753430.1 putative response regulator, CheY family BAC0487 Protein 6e-33 45
RPSI07_2806 YP_003753430.1 putative response regulator, CheY family BAC0308 Protein 1e-27 44
RPSI07_2806 YP_003753430.1 putative response regulator, CheY family BAC0197 Protein 6e-28 44
RPSI07_2806 YP_003753430.1 putative response regulator, CheY family BAC0111 Protein 3e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPSI07_2806 YP_003753430.1 putative response regulator, CheY family VFG0473 Protein 2e-32 46
RPSI07_2806 YP_003753430.1 putative response regulator, CheY family VFG1390 Protein 1e-29 45