Gene Information

Name : tISRso16b (RPSI07_2518)
Accession : YP_003753147.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2643534 - 2644325 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence :
ATGTCGCGCTCGTTGTACGGGTATCGGTCGGTTGCTCGCGACTCGTCGGCATTGCTTGCACGCATCAAAGAGATTGCGGC
CACACGCGTGCATTACGGCTATCGCCGGGTGCACGTGATGCTGCAGCGGGAGGGCTGGAAAGACAATCACAAACGCGTCT
ATCGCCTGTATCGAGCGGAAGGCTTGTCGCTGCGGCATAAACGCCCCAAGCGCAACAAGTCGGCGCGGCTACGCCAGCCC
AAGAGCATCGTCACGGGCATCAACGAAATCTGGAGCATGGACTTTGTATCCGACGCGTTGTTCGACGGCCGGCGCTTGCG
TGCGTTGACCGTGGTGGACAACTACACCAGGGAAAGCCTGGCCATCGAAGTCGGCCAAAGCCTGAAGGGGGAAGACGTTG
TGCAAGTGCTCGATGCCGTTGTTGCCCAGCGTGGCACGCCCCAAACCATCAAGGTGGACAATGGCAGCGAGTTCATCTCG
AAGGCGATGGACCGATGGGCATACGAGCACGGCGTGGAGCTCGACTTCAGTCGTCCAGGCACGCCTACAGGGAATGCCAA
GGTGGAGAGCTTCAACGGGCGGTTCCCCCAAAAGGGCCTGAATGAGCACTGGTTCTTGTCTCTGGAGGATGCGCGGAGCA
AAATCGCCGACTGGCGGCGGTACTATAACGAGAGTCGCCCCCACTCTGCATTGCAGTGGGCGACACCCGCCGAATTCGCC
CGTCAGGCAAGGAAGAGCGCCTCGACTGACGATGCAACGACGCCGGAAATCTCTACTTCTGGGCGGTACTAA

Protein sequence :
MSRSLYGYRSVARDSSALLARIKEIAATRVHYGYRRVHVMLQREGWKDNHKRVYRLYRAEGLSLRHKRPKRNKSARLRQP
KSIVTGINEIWSMDFVSDALFDGRRLRALTVVDNYTRESLAIEVGQSLKGEDVVQVLDAVVAQRGTPQTIKVDNGSEFIS
KAMDRWAYEHGVELDFSRPGTPTGNAKVESFNGRFPQKGLNEHWFLSLEDARSKIADWRRYYNESRPHSALQWATPAEFA
RQARKSASTDDATTPEISTSGRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-67 60
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-41 53
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-49 49
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 2e-28 48