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Name : dnaB (RPSI07_2056) Accession : YP_003752696.1 Strain : Ralstonia solanacearum PSI07 Genome accession: NC_014311 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 2147366 - 2148784 bp Length : 1419 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10404597, 6323420; Product type e : enzyme DNA sequence : ATGAATGCGCCGCGCCGCTATAATCCCGCCATGAACGCGCCCACCGATCCCCAGCTCGAATCCCTCAAGGTTCCGCCGCA TTCCATCGAGGCCGAACAGTCGGTGCTCGGCGGCTTGCTGCTGGATAACGCCGCGTGGGACCGCATTGCCGACTTCATCA ACGAGCACGATTTCTACCGCTACGACCACCGGCTGATCTTCCACAACATCGGCAAGCTGATCTCGCAGGCCAAGCCGGCC GACGTGATCACGGTGTACGAAATGCTGCAGGCATCGGGCAAGTCGGAAGAGGTGGGGGGGCTGGCCTACCTGAACGCACT GGCGCAGAACACGCCGAGCGCGGCCAACATCCGCCGCTATGCCGAGATCGTCCGTGACCGCGGCGTGCTGCGCCAGCTGG TGACGATTGCCGACGAGATTTCCGCCGGCGCCTTCAACCCGCAGGGCCGCGATGTACGCCAACTGCTGGACGAGGCCGAG TCGAAGGTGTTCGCGATCGCCGAAGAGGGGGCGCGGGGGCAGAAGGGCTTCTTGGAAATCCAGCCGCTGCTGACGCAGGT GGTCGAGCGCATCGACGAGCTGTACCACCGCGATAGCCAGAGCGACATCACCGGTATACCGACGGGTTTCGTTGACCTCG ACCGCATGACCAGCGGTATGCAGGGAGGTGACCTGATCATCGTGGCCGGCCGCCCCTCGATGGGTAAGACCGCGTTCTCG CTGAACATCGGCGAGCACGTGGCCGTGGAGCAGGGCTTGCCGGTGGCGGTGTTCTCGATGGAAATGGCGGGCACGCAGCT CGCCATGCGTATGCTCGGTTCGGTCGGCCGGCTGGACCAGCACCGCCTGCGCACGGGCCGCCTGCTCGACGAGGACTGGC CGCGCCTGACGCATGCCATCCAGAAGATGAACGACGCGCAGCTGTTCATCGACGAGACGCCGGCGCTGAACCCGATGGAA CTGCGCGCGCGCTCGCGCCGGCTGGCCCGGCAGTGCGGGCAGCTTGGCCTGATCATCATCGACTACCTGCAGCTGATGTC GGGCTCGGGAGGCGGCGAGAACCGCGCGACCGAGATCTCGGAAATCTCCCGCTCGCTCAAGGGGCTGGCCAAGGAACTCA ACTGTCCGGTGATTGCGCTGTCGCAGCTGAACCGGAGCCTGGAACAGCGCCCGAACAAGCGTCCCGTGATGTCGGACTTG CGCGAATCCGGTGCTATCGAACAGGATGCCGACGTGATCCTGTTCATCTATCGCGACCAGGTCTACAACCCCGACTCTCC CGACAAGGGCACCGCCGAAATCATCATCGGCAAGCAGCGTAACGGTCCGATCGGCACCGTCCGGCTGACGTTCCTGGGCG AATACACGAAGTTCGACAACTTCACCGGCGGCAACGCCTTCTTCGACAACGACACCTGA Protein sequence : MNAPRRYNPAMNAPTDPQLESLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFINEHDFYRYDHRLIFHNIGKLISQAKPA DVITVYEMLQASGKSEEVGGLAYLNALAQNTPSAANIRRYAEIVRDRGVLRQLVTIADEISAGAFNPQGRDVRQLLDEAE SKVFAIAEEGARGQKGFLEIQPLLTQVVERIDELYHRDSQSDITGIPTGFVDLDRMTSGMQGGDLIIVAGRPSMGKTAFS LNIGEHVAVEQGLPVAVFSMEMAGTQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQLFIDETPALNPME LRARSRRLARQCGQLGLIIIDYLQLMSGSGGGENRATEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDL RESGAIEQDADVILFIYRDQVYNPDSPDKGTAEIIIGKQRNGPIGTVRLTFLGEYTKFDNFTGGNAFFDNDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 9e-109 | 54 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-94 | 50 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-94 | 50 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 9e-90 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-91 | 47 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 5e-89 | 47 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 5e-89 | 47 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-92 | 46 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-75 | 45 |
