Gene Information

Name : hom (RPSI07_2040)
Accession : YP_003752680.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0460
EC number : 1.1.1.3
Position : 2130697 - 2132016 bp
Length : 1320 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11988515, 3139660, 8117070; Product type e : enzyme

DNA sequence :
ATGAAACCCATCAAGATCGGCCTGCTTGGGCTCGGTACCGTCGGTGGCGGTACGCTCAAGGTTCTGCAACGGAACCAGGA
AGAAATCCGGCGTCGCGCCGGGCGCGGCATTGAGGTCGCCCTGATTGCGGTGCGCAATGTCGACCGCGCACGCGCCATCG
TGGAGGAAGCCGGCGCCAGCGTGCCGGTGGTGAACGACCCGTTCGCGGTGGTGGATTCGCCCGAGATCGACATCGTGGTG
GAGCTGATCGGCGGCTATGACCTGACGCGCGAGCTGGTGCTGCGCGCCATCGCCAACGGCAAGCACGTGGTCACGGCCAA
CAAGGCGCTGCTGGCGGTGCACGGCAACGAGATCTTCAAGGCCGCCCAGGACAAGGGCGTGATGGTGGCGTTCGAGGCCG
CGGTGGCCGGCGGCATCCCCATCATCAAGGCGCTGCGCGAGGGGCTGACAGCCAACCGCATCGAGTGGATCGCCGGCATC
ATCAACGGCACCACCAACTTCATCCTGTCGGAGATGCGCGACAAGGGGCTGGATTTCGACACGGTGCTCAAGGAAGCCCA
GCGCCTGGGCTATGCCGAGGCCGATCCGACCTTCGATATCGAGGGCTTCGATGCGGCCCACAAGCTCACGCTGATGAGCG
CCATCGCCTTCGGCGTGCCGGTGCAGTTCGAGCGCGCCTACGTGGAGGGCATCACCAAGCTGGAAGCGGTCGATATCCGC
TACGCGGAGGAACTCGGCTACCGCATCAAGCTGCTCGGCCTGACGCGCCGCGCCGATGCCGGCATCGAGCTGCGCGTGCA
CCCGACGCTGGTGCCGGCCACGCGCCTGATCGCCAACGTGGAAGGCGCGATGAACGCCGTGGTGGTGCAGGGCGATGCCG
TCGGCCCGACGCTGTACTACGGCAAGGGCGCCGGCGCCGAGCCGACCGCCTCGGCCGTGGTGGCCGACCTGGTGGACGTG
ACGCGCCTGCATACCGCCGATCCGGAGCACCGCGTGCCGCACCTGGCGTTCCAGCCGGACGCGCTGTCCAACACGCCGCT
GCTGCCGATCGACGAAGTGCGCTCGGCCTACTATCTGCGCATGCGCGTGGCCGACGAGACCGGCGTGCTGGCCGACATCA
CCCGCATCCTGGCCGATGCCGGCATCTCGATCGACGCGATGCTGCAGAAAGAATCGCGCGAGGACGAGCCGCAGACCGAC
ATCATCATGCTGTCGCACGTGGTGGTGGAGAAGCAGGTCAATGCCGCCATCGCTGCCATCGAGGCGCTGCCGACCGTGCT
GTCCAAGGTCACGCGCCTGCGCATGGAAGAACTGAACTGA

Protein sequence :
MKPIKIGLLGLGTVGGGTLKVLQRNQEEIRRRAGRGIEVALIAVRNVDRARAIVEEAGASVPVVNDPFAVVDSPEIDIVV
ELIGGYDLTRELVLRAIANGKHVVTANKALLAVHGNEIFKAAQDKGVMVAFEAAVAGGIPIIKALREGLTANRIEWIAGI
INGTTNFILSEMRDKGLDFDTVLKEAQRLGYAEADPTFDIEGFDAAHKLTLMSAIAFGVPVQFERAYVEGITKLEAVDIR
YAEELGYRIKLLGLTRRADAGIELRVHPTLVPATRLIANVEGAMNAVVVQGDAVGPTLYYGKGAGAEPTASAVVADLVDV
TRLHTADPEHRVPHLAFQPDALSNTPLLPIDEVRSAYYLRMRVADETGVLADITRILADAGISIDAMLQKESREDEPQTD
IIMLSHVVVEKQVNAAIAAIEALPTVLSKVTRLRMEELN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 6e-105 60
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 6e-105 60