Gene Information

Name : ssuB (RPSI07_2026)
Accession : YP_003752666.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Resistance
Product : Aliphatic sulfonates import ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : 3.6.3.-
Position : 2114981 - 2115835 bp
Length : 855 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10506196, 16204527; Product type t : transporter

DNA sequence :
ATGCAAAGCAACGCCACCGAACACGCCGCGCTGGAACGCGTGGAACACCACGGCACCGCGCTGCACATCGGACGCGTGGT
CAAGCGCTACGGCGGGCGCGAGGTGCTGCACGGCATCGACCTGGAGATCGCGCCGGGCGAGTTCGTCGTCATCGTCGGGC
GCAGCGGTTGCGGCAAGAGCACGCTGCTGCGGCTGATCGCGGGGCTGGAGGGCATCGACGGCGGCAGCCTGCGCCGCGAC
GGCACGGCCGGAGACGGCCTGCACGACGATGCCCGCGTGATGTTCCAGGACGCCCGCCTGCTGCCGTGGAAGACGGTGCT
CGACAACGTCGCGCTCGGCCTGCCCAGGACGCAGCGCGCGCAGGCCGCCGAAGTGCTGGCGCAGGTCGGCCTGGCCGAGC
GTGCGGGCGAGTGGCCGGCGCGCCTGTCCGGCGGCCAGCGTCAGCGCGTGGCACTCGCCCGCGCACTGGTGCATCGTCCG
CGCCTGCTGCTGCTCGACGAGCCGCTGGGCGCGCTCGATGCGCTCACCCGCATCGACATGCAGAACCTGATCGAAGGCTT
ATGGCAGCGCCTGGGCTTCACCGCCGTGCTGGTCACCCACGATGTGGCCGAAGCCGTGGCCCTGGCCGACCGCGTGGTGC
TGATCGAGGACGGCCGCATCGCACTCGACGAGCGCATCGACCTGCCGCGCCCGCGGCACCGCGGTTCGCCGGCGTTTGCG
CGGCTGGAGGCGGCGATCCTCGATCGCGTGATGCAGCGCAGGCCCGATGCCGGCGAAGTGACCGATGTGCGCGCGCACAT
GGCGCGGCCGTCCCCCTGGGACGTGGCGGCCACGGCGGTGCGCTGGGCCGTGTAA

Protein sequence :
MQSNATEHAALERVEHHGTALHIGRVVKRYGGREVLHGIDLEIAPGEFVVIVGRSGCGKSTLLRLIAGLEGIDGGSLRRD
GTAGDGLHDDARVMFQDARLLPWKTVLDNVALGLPRTQRAQAAEVLAQVGLAERAGEWPARLSGGQRQRVALARALVHRP
RLLLLDEPLGALDALTRIDMQNLIEGLWQRLGFTAVLVTHDVAEAVALADRVVLIEDGRIALDERIDLPRPRHRGSPAFA
RLEAAILDRVMQRRPDAGEVTDVRAHMARPSPWDVAATAVRWAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-36 53
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-17 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-17 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_003752666.1 Aliphatic sulfonates import ATP-binding protein NC_012469.1.7686878. Protein 1e-17 41