|
Name : RPSI07_1988 (RPSI07_1988) Accession : YP_003752629.1 Strain : Ralstonia solanacearum PSI07 Genome accession: NC_014311 Putative virulence/resistance : Unknown Product : putative oligopeptide ABC transporter, fused atp_binding components Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 2074137 - 2076014 bp Length : 1878 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter DNA sequence : GTGACAGCAACCCAGCAGACCTCCATCGCGATGCCCGCGCAGCGCATCGTGCAGGTGCAGGACCTGAGCGTGCGCTTCGC CACGTCCGAGCGCGTGGTCGATGCGGTGCGCAACCTGTCGTTCCACGTCGATCGCGGCGAGACGCTGGCGGTGGTGGGCG AATCGGGCTCGGGCAAGTCGGTGACCTCGCTCGCGCTGATGCGGCTGGTGGAGCACGGCGGCGGCAGGATCGTCGGCGGG CACATGCACCTGCGCCGGCGCGGCGGCGAGGTGCTCGACCTGGCGAACGCCAGCCAGGCCGCCATGCGCGGCGTGCGCGG TGCCGACATCGCGATGATCTTCCAGGAGCCGATGACCTCGCTCAACCCGGTCTTCCCGGTGGGCGAGCAGATCGCCGAGT CGATCCGGCTGCACCAGGGCAAGTCGCGCGGCGAAGCCCGGGCCGAGGCGCTGCGCATGCTGGAGCAGGTGCGCATTCCC GAGGCGCGGCGGGTGCTGGCGCGCTACCCGCACCAGCTCTCGGGCGGCATGCGCCAGCGCGTGATGATCGCGATGGCGCT GTCGTGCCGGCCGTCGCTGCTGATCGCCGACGAGCCGACCACGGCGCTGGACGTGACCATCCAGGCCGAGATCCTGCAGT TGATCCGCGCGCTGCAGCAGGAGATGCAGATGGCGGTCGTCTTCATCACGCACGACATGGGCGTGGTGGCGGAGGTGGCC GATCGCGTGCTCGTCATGTACAAGGGCGAGCGCGTGGAGGAGGGGCCGTCGGCCACGGTGTTCGCGCAGCCGGCGCATCC GTACACGCGCGCGCTGCTGTCGGCGGTGCCGCAGCTGGGCGCGATGGCGGGCACCGACGGTCCGGCGCGTTTCCCGCTGG TGCGCGTGGACGGCACCGGCGTGCCGATCGACACGACACCGCAGCCGGCCGCGCCGCACGCCGGGCAGCCGATCCTGCGC GTGCGCGACCTGGTGACGCGCTTCGATGTGCCGACCGGGCTCTTCGGCCGGGTCACGCGGCGCGTGCACGCGGTCGAGCA GGTCAGCTTCGACCTGTACCCGGGCGAGACGCTGGCGCTGGTGGGCGAATCGGGCTGCGGCAAGTCGACCACGGGACGGT CGCTGCTGCGCCTGGTGGACAGCCAGAGCGGCAGCATCGAGTTCGCCGGCCAGAACATCGGCGCGCTCAAGGGGCACGCG CTGCAGACGCTGCGCCGCAACATCCAGTTCATCTTCCAGGACCCGTTCGCTTCGCTGGACCCGCGCGTGCCGGTCGGCTA CTCGATCATGGAGCCGCTGCTGGTGCACAAGGTGGCCTCGGGCAGGCAGGCGCAGGCGCGCGTGGAATGGCTGCTCGACA AGGTCGGCCTGCAGGCGGCGCATGCGTCGCGCTATCCGCACGAATTCTCGGGCGGCCAGCGGCAGCGCATCTGCATTGCG CGGGCGCTGGCGCTGAACCCGAAGGTGGTGATCGCCGACGAGTCGGTCTCGGCGCTGGACGTGTCCATCCAGGCGCAGAT CGTCAACCTGATGCTCGACCTGCAGAAGGAATTCGGCATCGCCTTCCTGTTCATCTCGCACGACATGGCGGTGGTGGAGC GCATCAGCCACCGCGTGGCGGTGATGTACCTGGGCCAGATCGTCGAGATCGGCCCGCGCCGGGCGATCTTCGAGAACCCG CAGCATCCGTACACGAGGAAGCTGATGTCGGCGGTGCCGGTCGCGGACCCGGCGCGCCGTCACCTGAAGCGCGAACTCTC CACGCACGAGATTCCCAGCCCGATCCGCGCCATCGGCGATGCGCCGGTGGTGCAGCCGTTGGTGCAAGTGGCGCCAGACC ACTTTGTTGCCCGCCATGCGATTGGCGGCGCTTATTGA Protein sequence : MTATQQTSIAMPAQRIVQVQDLSVRFATSERVVDAVRNLSFHVDRGETLAVVGESGSGKSVTSLALMRLVEHGGGRIVGG HMHLRRRGGEVLDLANASQAAMRGVRGADIAMIFQEPMTSLNPVFPVGEQIAESIRLHQGKSRGEARAEALRMLEQVRIP EARRVLARYPHQLSGGMRQRVMIAMALSCRPSLLIADEPTTALDVTIQAEILQLIRALQQEMQMAVVFITHDMGVVAEVA DRVLVMYKGERVEEGPSATVFAQPAHPYTRALLSAVPQLGAMAGTDGPARFPLVRVDGTGVPIDTTPQPAAPHAGQPILR VRDLVTRFDVPTGLFGRVTRRVHAVEQVSFDLYPGETLALVGESGCGKSTTGRSLLRLVDSQSGSIEFAGQNIGALKGHA LQTLRRNIQFIFQDPFASLDPRVPVGYSIMEPLLVHKVASGRQAQARVEWLLDKVGLQAAHASRYPHEFSGGQRQRICIA RALALNPKVVIADESVSALDVSIQAQIVNLMLDLQKEFGIAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAIFENP QHPYTRKLMSAVPVADPARRHLKRELSTHEIPSPIRAIGDAPVVQPLVQVAPDHFVARHAIGGAY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-102 | 41 |
