Gene Information

Name : tISRso14b (RPSI07_1639)
Accession : YP_003752284.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Unknown
Product : ISRSO14-transposase orfB protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1656352 - 1657179 bp
Length : 828 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
GTGGCGATTCGGCAGAAGGTCAACATCTCCGAGCGCCGCGCCTGCCGGCTTGTCGGGCTGTCCCGCAGCGTGCTGCACTA
TGAAGCTCAAGGTGACCCAGGTAATGAGGGACTCAAAGCGCGGCTGGTTGAGCTGGCGCATGAGCGTCGGCGCTTTGGCT
ACCGGCGACTGCACGTCCTGCTGGAACGCGAGGGCATCCATGCGAATCACAAACGCGTACACCGGCTGTACCGTGAGGCT
GGCTTGGCTGTACGGCGCAGACGGCGACGCCACGGGGTGATGGTGGAGCGCGAGCCACTGGCTCTGCCGGCTGCGCCGAA
CGAGGTCTGGTCGATTGATTTCGTGATGGACGCGCTATCCAACGGACGTCGCCTGAAGTGCCTGACCATCGTTGATGACT
TCACGAAGGAGGCGGTCGACATCGTCGTGGACCACGGCATCTCAGGCTTGTATGTGGCACGAGCGCTGGACCATGCGGCG
CGCTTCAGGGGCTATCCCAAAGCACTACGCACGGACCAGGGGCCGGAGTTCACGAGCCGAGCACTGGACCAGTGGGCCTA
CGCCAACGGCGTGTCCCTGAAATTGATTCAGGCCGGCAAACCGACGCAGAATGCCTACATCGAGTCGTTCAACGGCAAGT
TCCGTGACGAATGCTTGAACGAGCACTGGTTCACGAGCCTCGCCCATGCACGCGCTGTCATCGCAGCCTGGCGTCAGGAT
TACAACGAGACACGGCCGCACAGCGCCTTGAATTACCAACCGCCAGCAGAATTCGCAGCGCGGTATCGAGCAGCAGCGGT
AGCTCCTGCCGTCCAGGAGCAAACCTGA

Protein sequence :
MAIRQKVNISERRACRLVGLSRSVLHYEAQGDPGNEGLKARLVELAHERRRFGYRRLHVLLEREGIHANHKRVHRLYREA
GLAVRRRRRRHGVMVEREPLALPAAPNEVWSIDFVMDALSNGRRLKCLTIVDDFTKEAVDIVVDHGISGLYVARALDHAA
RFRGYPKALRTDQGPEFTSRALDQWAYANGVSLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTSLAHARAVIAAWRQD
YNETRPHSALNYQPPAEFAARYRAAAVAPAVQEQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-87 73
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-47 48
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 1e-41 44