Gene Information

Name : RPSI07_1483 (RPSI07_1483)
Accession : YP_003752135.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Unknown
Product : Integrase, catalytic region (tISRso16b)
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1513205 - 1514047 bp
Length : 843 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
TTGCGCGACCGCTATCGTGTGAGCCTGACCAAGGCTTGCGCGTTGTTTCACATGTCGCGCTCGTTGTACGGGTATCGGTC
GGTTGCTCGCGACTCGTCGGCATTGCTTGCACGCATCAAAGAGATTGCGGCCACACGCGTGCATTACGGCTATCGCCGGG
TGCACGTGATGCTGCAGCGGGAGGGCTGGAAAGACAATCACAAACGCGTCTATCGCCTGTATCGAGCGGAAGGCTTGTCG
CTGCGGCATAAACGCCCCAAGCGCAACAAGTCGGCGCGGCTACGCCAGCCCAAGAGCATCGTCACGGGCATCAACGAAAT
CTGGAGCATGGACTTTGTATCCGACGCGTTGTTCGACGGCCGGCGCTTGCGTGCGTTGACCGTGGTGGACAACTACACCA
GGGAAAGCCTGGCCATCGAAGTCGGCCAAAGCCTGAAGGGGGAAGACGTTGTGCAAGTGCTCGATGCCGTTGTTGCCCAG
CGTGGCACGCCCCAAACCATCAAGGTGGACAATGGCAGCGAGTTCATCTCGAAGGCGATGGACCGATGGGCATACGAGCA
CGGCGTGGAGCTCGACTTCAGTCGTCCAGGCACGCCTACCGACAATGCCAAGGTGGAGAGCTTCAACGGGCGGTTCCGGC
AGGAATGCCTGAATGAGCACTGGTTCTTGTCTCTGGAGGATGCGCGGAGCAAAATCGCCGACTGGCGGCGGTACTATAAC
GAGAGTCGCCCCCACTCTGCATTGCAGTGGGCGACACCCGCCGAATTCGCCCGTCAGGCAAGGAAGAGCGCCTCGACTGA
CGATGCAACGACGCCGGAAATCTCTACTTCTGGGCGGTACTAA

Protein sequence :
MRDRYRVSLTKACALFHMSRSLYGYRSVARDSSALLARIKEIAATRVHYGYRRVHVMLQREGWKDNHKRVYRLYRAEGLS
LRHKRPKRNKSARLRQPKSIVTGINEIWSMDFVSDALFDGRRLRALTVVDNYTRESLAIEVGQSLKGEDVVQVLDAVVAQ
RGTPQTIKVDNGSEFISKAMDRWAYEHGVELDFSRPGTPTDNAKVESFNGRFRQECLNEHWFLSLEDARSKIADWRRYYN
ESRPHSALQWATPAEFARQARKSASTDDATTPEISTSGRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-69 62
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-54 49