Gene Information

Name : RPSI07_1283 (RPSI07_1283)
Accession : YP_003751936.1
Strain : Ralstonia solanacearum PSI07
Genome accession: NC_014311
Putative virulence/resistance : Virulence
Product : putative type II secretion system protein G (gspG)
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 1306745 - 1307152 bp
Length : 408 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter

DNA sequence :
ATGCAGGAAACCCGCGGCTTTACCCTGCTTGAGCTGCTTGTCGTGGTCGCCATCATCGGCCTGCTGGCCGCCTATGTCGG
TCCGCGCTATTTTGCACAGCTGGGCAAGTCGGAAGTGGGCGTGGCGAAGGCACAGCTCCAGGCGTTCGAGAAGGCCATCG
ACCAGTACCGGCTCGACACGGGGCATTTCCCCACGACCGAACAGGGCCTCAAGGCGCTGACCGGCGCGCCCACGGGCGAA
ACGCGCTGGGGCGGCCCCTACCTGAAGAAGGACGTACCGCTCGATCCGTGGGGTCACGCCTACGAATACCGCCAGCCCGG
CGCCAACGGCCGCGAGTACGACATCGTCTCTTACGGCCGCGATGGCGCGGCCGGCGGCGAAGGCGAGAACGCCGACCTGA
CGAACTGA

Protein sequence :
MQETRGFTLLELLVVVAIIGLLAAYVGPRYFAQLGKSEVGVAKAQLQAFEKAIDQYRLDTGHFPTTEQGLKALTGAPTGE
TRWGGPYLKKDVPLDPWGHAYEYRQPGANGREYDIVSYGRDGAAGGEGENADLTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-11 45
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-11 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPSI07_1283 YP_003751936.1 putative type II secretion system protein G (gspG) VFG2050 Protein 1e-11 45
RPSI07_1283 YP_003751936.1 putative type II secretion system protein G (gspG) VFG0180 Protein 8e-13 44
RPSI07_1283 YP_003751936.1 putative type II secretion system protein G (gspG) VFG1871 Protein 3e-11 41