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Name : RPSI07_1281 (RPSI07_1281) Accession : YP_003751934.1 Strain : Ralstonia solanacearum PSI07 Genome accession: NC_014311 Putative virulence/resistance : Virulence Product : putative type II secretion system protein E (gspE) Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1303921 - 1305546 bp Length : 1626 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter DNA sequence : ATGTCCGAACTGGCGCCCGATTGGACAACATTCGGCAGCTGGCTGCGTGCTGCCCGTATGGCGCGGGGCAGCGGCAGCTT GGCCACGGCCCTCGCCGAGCAGGCCGGCATGCCGGCGCAGGCGCTGGTCTCGGCGTCGGCCGGCCGGTTCGGTTTCCATC TGCTGGATGCGGAAGGCGACCTCGCCCCGCTGGTCACGCTCGACCCGATCTCGCTCAAGGACTGCCGCCAGCACAAGATC CTGCCGCTGCGCATCGCCGGCGATTGGGTCGTCGCCATGGACGACCCATGGGACGAGGCGCTGGTGCGCTGGGTCAATGA GAAGCTCGGCCATGCCAGGCTCGCCTGGATGGACGGCCATCACAGCCTTGCCATCCTCGAACGCGCCCTGAGCACGGCCT CGGCTTCCGCCCTGCTCGCCCAGCGAGGCGCGGAAAAAACGATCCAGGACCAGGACGTCGGCCGTGTCGTTTCCCACGAC TCCATCGAATCGACGGAAAGCGCCGTCGTACGCTTCCTGGACGCGGTATTACTGGATGCATGGCGTGCCGGCGCCAGCGA CATCCACGTCGAGACCTCCCGCTCCGGCCTGCACATCAAGCTGCGGCTGGACGGCGTGCTGGTGCCCGGCCCCGCGTTCA CCGGTGCGCGCTCGCCAAGCGAAGTGCTGAACCGGATCAAGGTGCTGGCCCAGCTGGATATCGGCGAGACCCGGCTGCCG CAGGACGGCCGCTTCCGCGTGCGGCTGGAGGGGCGCGATGTCGACATGCGTGTCTCCATCATGCCCAACGTGTTCGGCGA GGATGCCGTCATCCGCTTGCTGGACAAGGCGCAATTGCGCGGCGCATCGGAAACGCTCACGCTGGAGGCGCTGGGCTTCG ACATCGCGGCCACCGACACCATCCGCCGGCTGACCAAGGAGCCGCACGGCATGCTGCTGGTGACCGGCCCCACCGGCAGT GGCAAGACCACCACGCTGTACGCTGCGCTCTCTGAAATCAACACCGGGCGCGACAAGATCATCACGATCGAAGATCCGGT CGAATATGAGTTGTCCGGCATCCTGCAGATTCCCGTCAACGAGAAGAAGGGCCTGACCTTCGCCCGCGGCCTGCGCTCGA TCCTGCGCCACGACCCGGACCAGATCCTGGTCGGTGAAATCCGCGACCCCGAGACGGCGGAGATTGCGGTGCAAGCCGCG CTGACCGGCCACTTGGTCTTCACGTCCGTGCACGCGAACTCGGCACTCGATGTGGTCGGCCGCTTCCTGCACATGGGTGT CGACCCCTACAACTTCATGTCGGCGCTGATCGGCATCGTGTCGCAGCGGCTGCTGCGCCTGAAATGCACGGAATGCGCGC CCGACTCGCCGGATCCGGGCAGCCGGTCTGTCGGATGTCCGGCCTGCCGGTACACGGGGTATCGGGGTCGTACCGTCGTC TGGGAAATCGTCCCCGTCAACGACATCATCCGCGAACTCGTGATCCGGCGCGAGCCGCTGCGGCTGATCCGCGAGCAGAG CCGGCAAATGGGCGTGGTGTCGCTGCGTGACCAGGCGGTCCGCATGGTGGAGCGCGGTCTGACAACGTTTGAAGAAATCG ACCGCGTGGTGTCGCCCAATGAATGA Protein sequence : MSELAPDWTTFGSWLRAARMARGSGSLATALAEQAGMPAQALVSASAGRFGFHLLDAEGDLAPLVTLDPISLKDCRQHKI LPLRIAGDWVVAMDDPWDEALVRWVNEKLGHARLAWMDGHHSLAILERALSTASASALLAQRGAEKTIQDQDVGRVVSHD SIESTESAVVRFLDAVLLDAWRAGASDIHVETSRSGLHIKLRLDGVLVPGPAFTGARSPSEVLNRIKVLAQLDIGETRLP QDGRFRVRLEGRDVDMRVSIMPNVFGEDAVIRLLDKAQLRGASETLTLEALGFDIAATDTIRRLTKEPHGMLLVTGPTGS GKTTTLYAALSEINTGRDKIITIEDPVEYELSGILQIPVNEKKGLTFARGLRSILRHDPDQILVGEIRDPETAEIAVQAA LTGHLVFTSVHANSALDVVGRFLHMGVDPYNFMSALIGIVSQRLLRLKCTECAPDSPDPGSRSVGCPACRYTGYRGRTVV WEIVPVNDIIRELVIRREPLRLIREQSRQMGVVSLRDQAVRMVERGLTTFEEIDRVVSPNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-75 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-75 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RPSI07_1281 | YP_003751934.1 | putative type II secretion system protein E (gspE) | VFG2048 | Protein | 4e-74 | 45 |
| RPSI07_1281 | YP_003751934.1 | putative type II secretion system protein E (gspE) | VFG0182 | Protein | 1e-72 | 45 |
| RPSI07_1281 | YP_003751934.1 | putative type II secretion system protein E (gspE) | VFG2426 | Protein | 1e-62 | 43 |
| RPSI07_1281 | YP_003751934.1 | putative type II secretion system protein E (gspE) | VFG1876 | Protein | 1e-70 | 43 |
| RPSI07_1281 | YP_003751934.1 | putative type II secretion system protein E (gspE) | VFG0233 | Protein | 7e-66 | 41 |
