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Name : adi (RPSI07_1103) Accession : YP_003751759.1 Strain : Ralstonia solanacearum PSI07 Genome accession: NC_014311 Putative virulence/resistance : Unknown Product : Lysine decarboxylase (LDC) Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 1110772 - 1113051 bp Length : 2280 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme DNA sequence : ATGAAATTCCGTTTTCCCGTCATCATCATCGACGAGGACTTCCGCTCCGAGAATATCTCCGGGTCGGGTATTCGCGCGCT GGCGCAGGCCATTGAAGAAGAGGGCATGGAGGTCACGGGCCTGACCAGCTACGGCGACCTGACCTCGTTCGCGCAGCAGT CGAGCCGCGCCTCCACCTTCATCGTCTCGATCGACGACGACGAGTTCATCAACCCGGACAACGACAAGCCGGAACCGGAA GCGGTGGAAAACCTGCGCGCCTTCGTCGCCGAAGTGCGCCGCCGCAATGCGGACATCCCGATCTTCCTGTACGGCGAGAC GCGCACCTCGCGCCACCTGCCGAACGACGTGCTGCGCGAGCTGCACGGCTTCATCCACATGTTCGAGGACACGCCGGAGT TCGTGGCGCGCCACATCATCCGCGAAGCCCGCAACTACCTGGATTCGCTGCCGCCGCCGTTCTTCAAGGCGCTGATCGAC TACGCGCAGGACAGCTCCTACTCGTGGCACTGCCCGGGGCACTCGGGCGGCGTGGCGTTCCTGAAGAGCCCGGTGGGCCA GGTGTTCCACCAGTTTTTCGGCGAGAACATGCTGCGCGCCGACGTCTGCAACGCGGTGGACGAGCTCGGCCAGCTGCTCG ACCACACCGGCCCGGTGGCGGCCTCCGAGCGCAATGCCGCGCGCATCTTCGGCTCGGACCACATGTTCTTCGTCACCAAC GGCACGTCCACCTCGAACAAGATGGTGTGGCACGCCAACGTGGCGCCCGGCGACATCGTGGTGGTGGACCGCAACTGCCA CAAGTCGATCCTGCACGCGATCATGATGACGGGCGCGATCCCCGTGTTCCTGATGCCGACGCGCAACCATTACGGCATCA TCGGCCCGATCCCGCAGAGCGAGTTCGAGCCGGAAACCATCGCCCGCAAGATTGCCGAGCATCCGTTCGCCAGCCAGGCC AAGAACAAGAAGCCGCGCATCCTGACCATCACGCAGGGCACGTACGACGGCGTGCTGTACAACGCCGAGCGCATCAAGCA CATGCTGTCGACCGAGATCGACACGCTGCACTTTGACGAAGCCTGGCTGCCGCACGCGTCGTTCCACCCGTTCTACCGCG ACATGCACGCCATCGGCCAGGGCCGCGCGCGCAGCAAGGACGCGCTGGTGTTCGCCACGCAGAGCACGCACAAGCTGCTG GCCGGCCTGTCGCAGGCTTCGCAGATCCTCGTGCAGGATTCCGAGACGCGCAAGCTGGACACGTACCGCTTCAACGAGGC GTACCTGATGCACACCTCGACCAGCCCGCAGTACTCGATCATCGCCTCGTGCGACGTGGCCGCGGCGATGATGGAAGCGC CGGGCGGCACCGCGCTGGTGGAAGAGAGCATCGCCGAGGCGCTGGACTTCCGCCGCGCCATGCGCAAGGTAGAGCAGGAG TACGTCGGCACGAATGGTGGCAATGGCCGCGGCGACGACTGGTGGTTCAAGGTCTGGGGCCCGAACGACCTGTCCGATGA GGGCATCGAGGAGCGCGAGGCCTGGATGCTCAAGGCCAACGAGCGCTGGCACGGCTTCGGCGATCTGGCCGAAGATTTCA ACCTGCTCGACCCGATCAAGGCCACCATCATCACCCCGGGCCTGGACGTGGACGGCAAGTTCAGCGAGTCGGGCATCCCG GCCGCCATCGTCACGAAGTACCTTGCCGAGCACGGCATCATCGTCGAGAAGACCGGGCTGTACTCGTTCTTCATCATGTT CACCATCGGCATCACCAAGGGCCGCTGGAACTCGCTGGTGACCGAGCTGCAGCAGTTCAAGGACGACTACGACAACAACC AGCCGCTGTGGCGCGTGCTGCCGGAGTTCGTGCGGCAGTATCCGCAATACGAGCGCATCGGCCTGCGCGAGCTGTGCGAC GGCATCCACAGCGTCTACAAGGCCAACGACGTGGCCCGCGTGACCACCGAGATGTACCTGTCGAACATGGAACCGGCGAT GAAGCCGTCGGACGCCTGGGCCAAGATGGCGCACCGCGAGACCGAGCGCGTGGCGATCGACGAACTGGAAGGCCGCATCA CCGCCATCCTGCTGACGCCGTATCCGCCGGGCATTCCGCTGCTGATCCCGGGCGAGCGCTTCAACCGGACCATCGTGCAG TACCTGCAGTTCGCGCGCGAGTTCAACAAGCTGTTCCCCGGCTTCGAGACCGACATCCACGGGCTGGTGGAGGAGGAGAT CGACGGCAGGATCGGGTACTTCGTCGACTGCGTCCGATAA Protein sequence : MKFRFPVIIIDEDFRSENISGSGIRALAQAIEEEGMEVTGLTSYGDLTSFAQQSSRASTFIVSIDDDEFINPDNDKPEPE AVENLRAFVAEVRRRNADIPIFLYGETRTSRHLPNDVLRELHGFIHMFEDTPEFVARHIIREARNYLDSLPPPFFKALID YAQDSSYSWHCPGHSGGVAFLKSPVGQVFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFGSDHMFFVTN GTSTSNKMVWHANVAPGDIVVVDRNCHKSILHAIMMTGAIPVFLMPTRNHYGIIGPIPQSEFEPETIARKIAEHPFASQA KNKKPRILTITQGTYDGVLYNAERIKHMLSTEIDTLHFDEAWLPHASFHPFYRDMHAIGQGRARSKDALVFATQSTHKLL AGLSQASQILVQDSETRKLDTYRFNEAYLMHTSTSPQYSIIASCDVAAAMMEAPGGTALVEESIAEALDFRRAMRKVEQE YVGTNGGNGRGDDWWFKVWGPNDLSDEGIEEREAWMLKANERWHGFGDLAEDFNLLDPIKATIITPGLDVDGKFSESGIP AAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSLVTELQQFKDDYDNNQPLWRVLPEFVRQYPQYERIGLRELCD GIHSVYKANDVARVTTEMYLSNMEPAMKPSDAWAKMAHRETERVAIDELEGRITAILLTPYPPGIPLLIPGERFNRTIVQ YLQFAREFNKLFPGFETDIHGLVEEEIDGRIGYFVDCVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 2e-113 | 41 |
