|
Name : hrcT (RPSI07_mp0819) Accession : YP_003749792.1 Strain : Genome accession: NC_014310 Putative virulence/resistance : Virulence Product : Hrp conserved hrct protein, Type III secretion system inner membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 997152 - 998000 bp Length : 849 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter DNA sequence : ATGGAATCGATCGATACTGTTGTGCACACCTGGTTCGATGCTGGTGAAAGTCTGGAGACGCTGCTCGTGCTGCTGGCGCT GAGTTGCGTGCGCATCATGACGCTCTTCGCCATCCTGCCCGCCACCAACGACCAGATGCTGACCGGCGTCGCGCGCAACG GCGTGGTCTACGCGCTGGCGATCCTGGTGGCGGCGGGCCAGCCGGTGGGGCTCGCCGCGCATCTCGGCGCGGCGCAGCTG TTCATGCTGACCTGCAAGGAGATCTTCCTGGGCGCGTGCCTGGGCTTCGCGGCGTCAACGGTGTTCTGGGTGGCGGAAAC GGCCGGCACCATCATCGACAACGTCTCCGGGTTCAACAACGTGCAGATGACCAACCCCCTGCGCGGCGATCAGAACACAC CGATCGGCAACACGCTGGTGAACCTGGCCGTGACGCTGTTCTATGCGGCTGGCGGCATGCTGTTCCTGCTCGGCGTCGTG TTCGAATCGTTCCAGTGGTGGCCGCTCGGAGCCGCGCTGCCCGATATGAACGTGGTTGCGCAAAGCTTCCTGCTGCAGCA GACCGACTCGATCTTCTCCATGGCCGTCAAGCTCGCCGCGCCCGTGATGATGACGGTGCTGCTGATCGACGCCGGCATCG GTCTGCTGGCGCGCGCGGCGGACAAGCTCGAGCCGACTTCGCTCGGTCAGCCGATCAAAGGCGCGGTGGCGCTGCTGATG GTGATGGCGTTGGTCACGGCGCTGTCCACTCAAGTCAAGGGTACGCTCACCTACAGCCAGTTGAAAGAGCAGGTCAAGCA AGGTTTGGTGGGTGACGGCACGTCGCCAAAAGCGAAAACTTCACAGTGA Protein sequence : MESIDTVVHTWFDAGESLETLLVLLALSCVRIMTLFAILPATNDQMLTGVARNGVVYALAILVAAGQPVGLAAHLGAAQL FMLTCKEIFLGACLGFAASTVFWVAETAGTIIDNVSGFNNVQMTNPLRGDQNTPIGNTLVNLAVTLFYAAGGMLFLLGVV FESFQWWPLGAALPDMNVVAQSFLLQQTDSIFSMAVKLAAPVMMTVLLIDAGIGLLARAADKLEPTSLGQPIKGAVALLM VMALVTALSTQVKGTLTYSQLKEQVKQGLVGDGTSPKAKTSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB8 | BAB07850.1 | HrpB8 | Virulence | Hrp PAI | Protein | 2e-49 | 50 |
| hrpB8 | AAF61279.1 | HrpB8 | Virulence | Hrp PAI | Protein | 2e-49 | 50 |
| hrcT | AAP34337.1 | HrcT | Virulence | Hrp PAI | Protein | 4e-50 | 50 |
| hrpB8 | YP_198732.1 | protein HrpB8 | Virulence | Hrp PAI | Protein | 2e-49 | 50 |
| hrcT | NP_640769.1 | HrcT protein | Virulence | Hrp PAI | Protein | 5e-50 | 50 |
| hrcT | NP_636612.1 | HrpB8 protein | Virulence | Hrp PAI | Protein | 6e-52 | 49 |
| XC_3004 | YP_244072.1 | HrpB8 protein | Virulence | Hrp PAI | Protein | 6e-52 | 49 |
| hrpB8 | AAB08463.1 | HrpB8 | Virulence | Hrp PAI | Protein | 2e-50 | 49 |
| hrcT | YP_362165.1 | HrcT protein | Virulence | Hrp PAI | Protein | 2e-50 | 49 |
