Gene Information

Name : hpaB (RPSI07_mp0799)
Accession : YP_003749772.1
Strain :
Genome accession: NC_014310
Putative virulence/resistance : Virulence
Product : Type III secretion system protein, hypothetical tir chaperone-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 982569 - 983024 bp
Length : 456 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 18313258; Product type cp : cell process

DNA sequence :
ATGAGTCTTGAGCAACGCGATGCACTGGTCCGCGACATGTGCGGCCATCTGGGCATCCCGGATGCGGAGGCCATCCTTGC
CGCCGGCCGGCTGACCGTAGAAGGCTTCGACGTCATCATCGACGCCGTCGAGGACGACCCCGCGGCGTTCTACCTGAACT
TCGACTACGGCATCGTCACCGGCGGCCGCACCCTGCGCGTCTTCCGGCTGATGCTGGAAGCCAACCTCACCATCTATGCG
CAGGACCACGCACAGCTCGGCCTGGACGGCGATACCGGCGGGATCATCCTGATCGTCCGCGTCGCCTATTCGCCCGACCT
GGACGGCGAGCAACTGGCCGAATTGCTGGGCCACTATGCAGAACACGGACGTTACTGGCGGGACAACATACTGCAAACCA
CCGATGACATGTTCGAAAGTCTGTCGAACGGCACTTATCTATGGATTCGCGCATGA

Protein sequence :
MSLEQRDALVRDMCGHLGIPDAEAILAAGRLTVEGFDVIIDAVEDDPAAFYLNFDYGIVTGGRTLRVFRLMLEANLTIYA
QDHAQLGLDGDTGGIILIVRVAYSPDLDGEQLAELLGHYAEHGRYWRDNILQTTDDMFESLSNGTYLWIRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaB YP_198714.1 protein HpaB Virulence Hrp PAI Protein 2e-29 48
hpaB YP_362147.1 HpaB protein Virulence Hrp PAI Protein 7e-29 48
hpaB AAD21328.1 HpaB Virulence Hrp PAI Protein 4e-29 48
hpaB BAB07868.1 HpaB Virulence Hrp PAI Protein 1e-29 48
XC_3022 YP_244090.1 HpaB protein Virulence Hrp PAI Protein 3e-28 48
hpaB NP_636594.1 HpaB protein Virulence Hrp PAI Protein 3e-28 48
hpaB NP_640751.1 HpaB protein Virulence Hrp PAI Protein 5e-29 46
hpaB AAP34355.1 HpaB Virulence Hrp PAI Protein 3e-29 46