Gene Information

Name : insC (RPSI07_mp1440)
Accession : YP_003750382.1
Strain :
Genome accession: NC_014310
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1745332 - 1745697 bp
Length : 366 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
ATGGAAGTGTTGACGGGCCCGGAGCGCCGCCGGCGGTGGTCGGTGGACGAGAAGCTGGCGATGGTCCGGGAGAGTTTCGA
GCCGGGCAAGACGGTCTCGATGGTGGCGCGCCAGCACGGTGTGAATCCGAATCAGGTGTTCCACTGGCGCAAGCTGTACC
AGGGCGGGAGCCTGTCGGCGGTGAGTGCGGGCGAGGAAGTGGTGCCGGCCTCCGAGTTGGCCGAAGCGCTCAAGCAAGTC
CGTGAACTGCAGCGCATGCTTGGCAAGAAGACGATGGAGAACGAGATTCTGCGCGAAGCCGTGGAATACGGTCGGGCAAA
AAAGTGGATAGCGCGCTCGCCATCGTTGCCGGGGGACGACCAGTGA

Protein sequence :
MEVLTGPERRRRWSVDEKLAMVRESFEPGKTVSMVARQHGVNPNQVFHWRKLYQGGSLSAVSAGEEVVPASELAEALKQV
RELQRMLGKKTMENEILREAVEYGRAKKWIARSPSLPGDDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 7e-40 71
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 7e-40 71
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 7e-40 71
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 1e-39 71
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 1e-39 71
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 1e-39 71
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 6e-40 71
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 8e-40 71
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 3e-39 70
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 2e-39 70
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 2e-39 70
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 8e-27 69
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 1e-26 69
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 5e-27 65
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 5e-27 65
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-27 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insC YP_003750382.1 transposase VFG0648 Protein 2e-40 71
insC YP_003750382.1 transposase VFG0609 Protein 6e-40 70
insC YP_003750382.1 transposase VFG0622 Protein 6e-40 70
insC YP_003750382.1 transposase VFG1733 Protein 3e-27 69