Gene Information

Name : xerD (RCFBP_10852)
Accession : YP_003744793.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 890128 - 891054 bp
Length : 927 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10635320, 7744017, 9268326; Product type e : enzyme

DNA sequence :
ATGACCGATACGACCCCCGATACCCCGACCCTGCCCCCGCGCAGCACGGAAGCCATCCAGCGCTTCTGCGATGCGCTGTG
GCTCGAAGACGGCCTCGCCCGCAACACGCTCGATGCCTACCGGCGCGACCTGACGCTCTACGCGCAATGGCTTGCCGGGC
GCGGCAAGGCGATCGACCAGACCGAAGACGACGATCTCGCCGACTACTTCGCCGCGCGCCACGAAGCGAGCCGCGCCTCC
ACCGCCAACCGGCGCCGCACCGTATTCAAGCGCTTCTTCCAGTGGGCCTTGCGCGAGCACGTGGTCGGTGCCGATCCGTC
GCGCCTGCTGTCGACCGCCAAGCAGCCGCCGCGCATTCCCAAGACGCTGTCCGAAGCGCAGGTCGAGGCACTGATTGCCG
CGCCCGATGTCGACACGCCGCTCGGCCTGCGCGACCGCGCCATGATCGAGCTGATGTATGCAAGCGGCCTGCGCGTGTCG
GAAATCGTCGCGCTCAAGAGCGTCGAGGTGGGCCTGAACGAGGGCGTGGTGCGCGTGATCGGCGGCAAGGGCGGCAAGGA
CCGGCTGGTCCCATTCGGCGCCGAGGCCGGCGACTGGCTGCGGCGTTACCTTCGCGACGGTCGCACCGCGCTGCTGGGCA
AGCGCACCGCCGACGCGCTGTTCGTCACCGCGCGCGGCGACGGCATGACACGCCAGGCCTTCTGGCACCTGATCAAGCGC
TACGCCCTGCGCGCCGACATCCACGCGCCGCTGTCGCCGCACACGCTGCGGCACGCCTTCGCCACGCACCTGCTCAATCA
CGGCGCCGACCTGCGCGTGGTGCAGATGCTGCTGGGCCACGCCGACATCTCCACCACGCAGATCTACACCCACGTCGCGC
GCGAGCGGCTGCGCACGCTGCATGCGCAGCACCATCCGCGCGGCTAG

Protein sequence :
MTDTTPDTPTLPPRSTEAIQRFCDALWLEDGLARNTLDAYRRDLTLYAQWLAGRGKAIDQTEDDDLADYFAARHEASRAS
TANRRRTVFKRFFQWALREHVVGADPSRLLSTAKQPPRIPKTLSEAQVEALIAAPDVDTPLGLRDRAMIELMYASGLRVS
EIVALKSVEVGLNEGVVRVIGGKGGKDRLVPFGAEAGDWLRRYLRDGRTALLGKRTADALFVTARGDGMTRQAFWHLIKR
YALRADIHAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLRTLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-51 55
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-51 55