|
Name : kdpB (RCFBP_10082) Accession : YP_003744049.1 Strain : Ralstonia solanacearum CFBP2957 Genome accession: NC_014307 Putative virulence/resistance : Unknown Product : p-type ATPase, high-affinity potassium transporter, b chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 90371 - 92608 bp Length : 2238 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15379567, 6146979, 9858692; Product type t : transporter DNA sequence : ATGGCTCTCCGTTATCCCGAATCCGATCCCGTGGTGCGCACCGTCAAACAGCGGTTCGACGGTGCAGATGCCGCCGCCCA GGGCGGCGCGCAAGTCCGCGCCACCACGACGCACCATGGCGCGCAGCATCCGCTGACCGCCAAGGAGGTGCGCAAGCTGT CGATGTTCTCGCCGGCGCTGGTCAAGCCCGCCATCATCGACAGCTTCCGCAAGCTGTCGCCGCGCGCGCAGGCCAAGAAC CCGGTGATGTTCGTCGTCTACATCGGCAGCATCCTGACCACCCTGCTGTGGGTCATGGCGCTGCGCGGCCAGGCCGAGGC CCCGGCGGGCTTCATCCTGGCCGTGTCGGTGTGGCTGTGGTTCACCGTGCTGTTCGCCAACTTTGCCGAGGCGCTGGCCG AGGGCCGCAGCAAGCAGCAGGCCGCGTCGCTGCGCGGCATCAAGACCACTGTGCAGGCCAAGGTGCTGGCTGATCCGCAG CGCCGCGACCGTGTGCAGCCGCGCGCGGCCACCGCGCTGCGCCGCGGCGACATCGTCCTCATCGAAGCCGGCGACATGGT GCCCGGCGACGGCGAGGTCATCGAAGGCGTGGCCTCGGTGGACGAGAGCGCCATCACCGGCGAATCCGCACCGGTGATCC GCGAATCCGGCGGCGATTTCTCGTCGGTCACCGGCGGCACGCGCGTGCTGTCGGACTGGATCGTGGTGCGCATCACCGCC AACCCGGGCGAGAGCTTCCTCGACCGCATGATCTCGATGGTGGAAGGCGCCAAGCGCCAGAAGACGCCCAACGAGCTGGC GCTGACCATCTTGCTGGTGAGCCTGACCATCATCCTGCTGCTGGCGACCGTCACGCTGCTGCCGTATTCGATCTTCTCGG TGGAGGTGATGAAGGCCGCGGGTGTGACCAGTTCGCCCATCACCATCACCGTGCTGGTCGCGCTGCTGGTGTGCCTGATC CCGACCACCATCGGCGGGCTGCTGTCGGCCATCGGCGTGGCGGGCATGAGCCGCATGATGCAGGCCAACGTGATCGCCAC CTCGGGCCGCGCGGTCGAAGCCGCCGGCGACGTGGATGTGCTGCTGCTGGACAAGACCGGCACCATCACGCACGGTAACC GCCAGGCTTCGCGCTTCTTGCCCGCGCCGGGCGTGACGGTCAAGGCGCTGGCCGAAGCCGCATGGCTGTCGTCGCTGGCC GACGAAACGCCCGAAGGCCGCAGCATCGTGACGCTGGCGCGCCAGCTGGGCGAGGCCGCCGTCGATGAGGCCGCGCTCGC GCAGTCGCAGCCGGTGTTCGTGCCCTTCTCGGCGCAGACGCGCATGAGCGGCATCAACGTGGCCCTCGACGGCCGGGCAC ACCAGATCCGCAAGGGCGCCGCCGACGCCATCCGCACGCACGTGACGGTGCTGGCCGGCAAGTTCCCCGACGCCGTGCTG GCGGCCGTGGAAGACGTGGCGCGCAAGGGCGGCACGCCGCTGGTGGTGTCCGACGACGATCGCGTGATGGGCGTGGTGGA ACTGAAGGACATCGTCAAGGCCGGCATCCGCGAGCGCTTTGCCGAGCTGCGCCAGATGGGCATCAAGACCGTGATGATCA CCGGCGACAACCGCCTGACCGCCGCCTCCATCGCGGCCGAAGCGGGCGTCGACGACTTCATCGCCGAGGCCACGCCCGAG ACCAAGCTCGCGCTGATCCGCGAACAGCAGGCGCAGGGCCGCCTGGTGGCGATGACCGGCGACGGCACCAACGACGCGCC CGCGCTCGCGCAGGCCGACGTGGCGGTCGCGATGAACAGCGGCACGCAGGCGGCCAAGGAGGCCGGCAACATGGTCGACC TGGATTCCAGCCCGACCAAGCTGATCCAGATCGTCGAGATCGGCAAGCAGATGCTGATGACGCGCGGCTCGCTGACCACG TTCTCGATCGCCAACGACGTGGCCAAGTACTTCGCCATCATCCCGGCGGCGTTCGCGACCACCTACCCGCAGTTGGCCGC GCTCAACGTGATGCACCTGGCCACGCCCGCGTCGGCCGTGATGAGCGCGGTGATCTTCAATGCGCTGATCATCGTGTTCC TGATCCCGCTGGCGCTCAAGGGCGTGAAGTACCGCCCGCTCGGCGCCGCCGCGCTGCTGCGCCGCAATCTCTGGATCTAC GGCCTGGGCGGCTTGCTGCTGCCCTTCCCCGGCATCAAGCTGATCGACATGTTCCTGGCCGCGATGGGCTGGGTCTGA Protein sequence : MALRYPESDPVVRTVKQRFDGADAAAQGGAQVRATTTHHGAQHPLTAKEVRKLSMFSPALVKPAIIDSFRKLSPRAQAKN PVMFVVYIGSILTTLLWVMALRGQAEAPAGFILAVSVWLWFTVLFANFAEALAEGRSKQQAASLRGIKTTVQAKVLADPQ RRDRVQPRAATALRRGDIVLIEAGDMVPGDGEVIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVVRITA NPGESFLDRMISMVEGAKRQKTPNELALTILLVSLTIILLLATVTLLPYSIFSVEVMKAAGVTSSPITITVLVALLVCLI PTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTITHGNRQASRFLPAPGVTVKALAEAAWLSSLA DETPEGRSIVTLARQLGEAAVDEAALAQSQPVFVPFSAQTRMSGINVALDGRAHQIRKGAADAIRTHVTVLAGKFPDAVL AAVEDVARKGGTPLVVSDDDRVMGVVELKDIVKAGIRERFAELRQMGIKTVMITGDNRLTAASIAAEAGVDDFIAEATPE TKLALIREQQAQGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSSPTKLIQIVEIGKQMLMTRGSLTT FSIANDVAKYFAIIPAAFATTYPQLAALNVMHLATPASAVMSAVIFNALIIVFLIPLALKGVKYRPLGAAALLRRNLWIY GLGGLLLPFPGIKLIDMFLAAMGWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-160 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-160 | 60 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-141 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-140 | 53 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 8e-141 | 53 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-140 | 53 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-140 | 53 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-140 | 53 |
