Gene Information

Name : qseB (RCFBP_10060)
Accession : YP_003744029.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 56140 - 56805 bp
Length : 666 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type r : regulator

DNA sequence : 
ATGCGAGTCCTGCTGATCGAAGATGACCCGATGATCGGCGCGGTGGTGGAAGCCGCGCTGCGCGACGCCGCCTACGCGGT
GGACTGGGTGCGCGACGGCCAGACCGCCATCGACGTGAGCGGGCACCAGCACTACGACGTGCTGCTGCTCGATCTCGGCC
TGCCCGGCCAGGATGGCCACGCGGTGCTGCGCACGCTGCGCGCGCGGGACAACCCGGTGCCGGTGCTGATCCTCACCGCG
CGCGATGCCGTGGACGAGCGCGTGCGCGGCCTGGACGGCGGCGCCGACGACTACGTGCTCAAACCCTTCGAGATGGTGGA
ACTGCTGGCGCGCATGCGCGCGGTGCTGCGGCGCCGGGGCGGGGCGGCCAGCCCGGTGCTGAGCAACGGCATGCTGTCGC
TCGACCCGGCCACGCACGAGGTGCGCGTGGGCGACGGCGAAGCGGTGCGCCTGTCGGGCCGCGAGTTCGCGCTGCTGCAG
ACGCTGATGCTGCGGCCCGGCGCGATCCTGTCGCGCAGCGAACTGGAGGAGCGCATCTACGGCTGGGGCCACGAGGTGGC
CAGCAACGCGGTCGAGTTCCTCATCCACGCGCTGCGCAAAAAGCTGGGCGCGGAGTCGATCAAGAACGTCAGGGGCGTGG
GATGGATGGTGTCCAAGGGGCGGTAA

Protein sequence : 
MRVLLIEDDPMIGAVVEAALRDAAYAVDWVRDGQTAIDVSGHQHYDVLLLDLGLPGQDGHAVLRTLRARDNPVPVLILTA
RDAVDERVRGLDGGADDYVLKPFEMVELLARMRAVLRRRGGAASPVLSNGMLSLDPATHEVRVGDGEAVRLSGREFALLQ
TLMLRPGAILSRSELEERIYGWGHEVASNAVEFLIHALRKKLGAESIKNVRGVGWMVSKGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-24 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003744029.1 transcriptional regulatory protein BAC0197 Protein 2e-24 43
qseB YP_003744029.1 transcriptional regulatory protein BAC0487 Protein 4e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003744029.1 transcriptional regulatory protein VFG0473 Protein 4e-27 42