Gene Information

Name : RCFBP_10516 (RCFBP_10516)
Accession : YP_003744466.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Virulence
Product : response regulator, chey family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 531693 - 532400 bp
Length : 708 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : regulator

DNA sequence :
ATGCGGATCTTGCTGGTGGAGGACGAAGAAGAACTGGCGGCATGGCTGTCGCGCGCGCTGGCGCAAAGCAGCTTCGTGGT
GGAGCGCGCGGCGGACGGGCTGGCGGCGGAGGCGTTCCTGGCCTCCGGCGAATTCGATGCCGTCGTGCTGGACCTGCGCC
TGCCGCGCAAGGACGGTTTTGCCGTGCTGGCCGACATGCGCGCGCGCGACGATCGCACGCCGGTGCTGATCCTGACGGCA
CAGGGTGCGCTGGACGAGCGCGTGCGCGGCCTGAACGCCGGCGCCGACGACTTCCTCACCAAGCCGTTCGCGCTGACGGA
ACTGGAAGCGCGGCTGATGGCGCTGATCCGTCGCAGCCGGGGCCGGGCGTTCCCGCGTCTGCGCTGCGGGCCGCTGGAAT
TCGACACCGGCCGCAAGGCCTTCCTGCTGGCGGGCGAGGCGCTGTCGCTGACACCGCGAGAGCACGCCGCCCTGTCCGCG
CTGCTGCACAAGACCGGGCAGCCGATCAGCAAGGTCCACCTGTTCGACAAGGTATTCAACCTGGACAGCGACTCCAGCCC
GGATGCCGTGGAAGTGGTGGTGCACCGCCTGCGCAAGAAGCTGGCCGGGTCCGGCGTGCAGATCGTCACGGTGCGGGGGC
TGGGCTACCTGCTCGAAGCCGAGACGGACGGCATCCCGCAGGCGGCGGACGACACGTCCGCGCTATGA

Protein sequence :
MRILLVEDEEELAAWLSRALAQSSFVVERAADGLAAEAFLASGEFDAVVLDLRLPRKDGFAVLADMRARDDRTPVLILTA
QGALDERVRGLNAGADDFLTKPFALTELEARLMALIRRSRGRAFPRLRCGPLEFDTGRKAFLLAGEALSLTPREHAALSA
LLHKTGQPISKVHLFDKVFNLDSDSSPDAVEVVVHRLRKKLAGSGVQIVTVRGLGYLLEAETDGIPQAADDTSAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCFBP_10516 YP_003744466.1 response regulator, chey family VFG0473 Protein 2e-34 42