Gene Information

Name : RCFBP_10364 (RCFBP_10364)
Accession : YP_003744318.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Unknown
Product : isrso14-transposase orfb protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 377558 - 378385 bp
Length : 828 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
TTGATGACCGAACGCGCCATGGGTGTCACCCGGGCCTGCGGGCTGGTAGGGATTTCGCGCTCGCTGTTTCACTACGAATC
GCGGCGCCGAGTCGACGACGAAGCGCTGACTGGCCGGATGATGGCCATCACCGCGCAGAAGCGCCGCTACGGCTATCGCC
GGATTCACGTGCTGTTGCAGCGGGAGGGCTGGCTGGCCAACCACAAGCGCATTTGGCGCCTGTACAGCAAGGCGGGGCTG
AGCGTGCGCAAGCGGCGACGCAAGCGCATTGCGGCTGTCGAACGCAAGCCGCTGCCGGTGCCAACGGGCCCAAACCAGAG
CTGGTCGATGGACTTTGTTTCCGACGGGCTGGCCTATGGTCGGCGGTTTCGCTGCCTGAACGTGGTCGACGATTACACGC
GCGAATGCGTGGCTATCGAGGTTGATACCTCGTTGCCGGGCTTGCGAGTGAAGCAAGTGCTTGAACGGCTGAAGGATATG
CGAGGCTTGCCCGCGTCCATCACGGTGGACAACGGTCCGGAGTTCGCTGGTAAGGTGCTGGACGCATGGGCCTACGAGGC
GGGCGTCACGCTGTCGTTCATCCGGCCCGGCAAGCCAGTGGAGAACGCCTACATCGAGAGCTTCAACGGGCGGTTCCGCG
ATGAGTGCCTGAACGAGCACTGGTTCGTCTCAATGCGCCACGCCAGGCAGCTGATTGAGGAATGGCGTATCGAGTACAAC
ACCGAGCGGCCTCACAGTTCGCTCGGCTACATGACCCCGGTGCAGTTCGCGCAAGGACATGAGCAGAAAGAGTTTTTAAC
CTCGGACTCTACCTGCGCTTCGTACTAA

Protein sequence :
MMTERAMGVTRACGLVGISRSLFHYESRRRVDDEALTGRMMAITAQKRRYGYRRIHVLLQREGWLANHKRIWRLYSKAGL
SVRKRRRKRIAAVERKPLPVPTGPNQSWSMDFVSDGLAYGRRFRCLNVVDDYTRECVAIEVDTSLPGLRVKQVLERLKDM
RGLPASITVDNGPEFAGKVLDAWAYEAGVTLSFIRPGKPVENAYIESFNGRFRDECLNEHWFVSMRHARQLIEEWRIEYN
TERPHSSLGYMTPVQFAQGHEQKEFLTSDSTCASY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 2e-51 56
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-67 51
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 4e-50 50
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 8e-47 42