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Name : thiC (RCFBP_21339) Accession : YP_003747094.1 Strain : Ralstonia solanacearum CFBP2957 Genome accession: NC_014307 Putative virulence/resistance : Unknown Product : thiamin (pyrimidine moiety) biosynthesis protein Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 3295178 - 3297073 bp Length : 1896 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9371431; Product type f : factor DNA sequence : ATGCCCCAAGCCAAGAACGCCCCCGCCGCCTCATTCGACTCGCTGCAGACCGAGCTCGACCAGAAGTTCGCCTATCCGGC CTCCAGCAAGACCTACATCACCGGCAGCCGCCCGGACATGCGCGTGCCGATGCGCACCATCAGGCAGACCGCCACGCGCA CCGACCAGGGCGAGATGCTGAACCCGCCGGTCCCCGTGTACGACACCTCGGGCCCGTACTCCGACCCCGACGTGCATATC GACCTGAAGGCGGGCCTGGCCCCGCTGCGCGCCAAGTGGATCGACGAGCGCGGCGACACCGTGGTGCTGCCGAGCCTGTC GTCGGAATACGGCCAGGCGCGCGCGCATGACCCGGCCACCGCCCACCTGCGCTTTGCGCAACTGACCAACCCGCGCCGCG CCAAGCCGGGCGCGAACGTGAGCCAGATGCACTACGCGCGCCGCGGCATCATCACGCCGGAAATGGAATACGTCGCGCTG CGCGAATCGCTGAACCTGCAGGCGCTGCAAGACAAGCCCGAGTACCGCAAGCTGCTCAAGCAGCATCCGGGCTTCTCGTA CGGCGCCAACCTGCCGCAGCGCCCGGAAGACATCACGCCGGAATTCGTGCGCCAGGAAATCGCCGCCGGCCGCGCCATCA TTCCGGCCAACATCAACCACGTCGAGCTGGAGCCGATGGCCATCGGCCGCAACTTCCGCGTGAAGATCAACGGCAACCTG GGCAACTCGGCGGTCACCTCGTCGCTGGCCGAGGAAGTGGAAAAGATGGTGTGGGCGATCCGCTGGGGCGCCGACACCAT CATGGACCTGTCCACCGGCAAGCACATCCACGAGACGCGCGAATGGATCCTGCGCAACTCGCCGGTGCCCATCGGCACGG TGCCGATCTACCAGGCGCTGGACAAGACCGGCGGCGTGGCCGAAGACCTGACGTGGGAGATGTTCCGCGACACGCTGATC GAGCAGGCTGAACAGGGCGTGGACTACTTCACCATCCACGCCGGCGTGCTGCTGCGCTATGTGCCGCTGACGGCCGATCG CGTGACGGGCATCGTCTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTGGCGCATCACAAGGAAAACTTCCTGTACA CGCACTTCGACGAGATCTGCGAAATCATGAAGGCGTATGACGTGTCGTTCAGCCTGGGCGACGGCCTGCGCCCGGGTTGC ATCGCCGACTCGAACGACGCCGCGCAGTTCGGCGAGCTGCACACGCTGGGCGAGCTGACCAAGAAGGCGTGGGAGCACGA CGTGCAGGTGATGATCGAAGGCCCGGGCCACGTGCCGCTGCAGCGCGTGCAGGCCAACATGGACGAAGAGCTCAAGCACT GCTTCGAAGCCCCGTTCTATACGCTGGGCCCGCTGGTGACCGACATCGCCCCGGGCTACGACCACATCACCAGCGGCATC GGCGCGGCCAACATCGGCTGGTACGGCACGGCCATGCTGTGCTACGTCACGCCCAAGGAACACCTGGGCCTGCCGGACAA GGAAGACGTGCGCGAGGGCATCATCACCTACAAGATCGCCGCGCACGCCGCCGACCTGGCCAAGGGCTGGCCGGGCGCGC AGCTGCGCGACAACGCGCTGTCGAAGGCACGCTTCGAATTCCGCTGGGAAGACCAGTTCAACCTCGGCCTCGACCCCGAG AAGGCACGCGCCTTCCACGACGAGACGCTGCCCGCCGAGGGCGCCAAGATTGCCCACTTCTGCTCGATGTGCGGCCCGAA ATTCTGCTCGATGAAGATCACGCAGGAGGTGCGCGACTACGCGGCCTCGCTCGAATCCAACACCACCGCCGCTGTGCAGG GCATGGAAGAGAAGTCGATCGAGTTCCGCAAGGCCGGCGCAAAGATCTACACCTAA Protein sequence : MPQAKNAPAASFDSLQTELDQKFAYPASSKTYITGSRPDMRVPMRTIRQTATRTDQGEMLNPPVPVYDTSGPYSDPDVHI DLKAGLAPLRAKWIDERGDTVVLPSLSSEYGQARAHDPATAHLRFAQLTNPRRAKPGANVSQMHYARRGIITPEMEYVAL RESLNLQALQDKPEYRKLLKQHPGFSYGANLPQRPEDITPEFVRQEIAAGRAIIPANINHVELEPMAIGRNFRVKINGNL GNSAVTSSLAEEVEKMVWAIRWGADTIMDLSTGKHIHETREWILRNSPVPIGTVPIYQALDKTGGVAEDLTWEMFRDTLI EQAEQGVDYFTIHAGVLLRYVPLTADRVTGIVSRGGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGC IADSNDAAQFGELHTLGELTKKAWEHDVQVMIEGPGHVPLQRVQANMDEELKHCFEAPFYTLGPLVTDIAPGYDHITSGI GAANIGWYGTAMLCYVTPKEHLGLPDKEDVREGIITYKIAAHAADLAKGWPGAQLRDNALSKARFEFRWEDQFNLGLDPE KARAFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYAASLESNTTAAVQGMEEKSIEFRKAGAKIYT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 80 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 73 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 73 |
