Gene Information

Name : RCFBP_21304 (RCFBP_21304)
Accession : YP_003747060.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Resistance
Product : transmembrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3258174 - 3259103 bp
Length : 930 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type m : membrane component

DNA sequence :
ATGGCATCCAACCGTCTCATCACGATACTGGCCACCGCCCTGGCGCCGTGCCTGTGGGGCACGACGTACATCGTCTTCAC
GCAGACCCTGCCGGTTTCGCATCCGCTGCTGGTGGGCGCGCTGCGCGCGTTGCCGGCGGGCATCCTGCTGATGCTGCTCG
GGCCCGGCCTGCCGCCGCGCGACAAGCTGGGGCGGCTCGCGCTGGTCGGGGTGGCGAACATCGGCGTGTTCTTCGCGCTG
CTGTTCGTGGCGGCGGCGCGCCTGCCCGGCGGCGTGGCGGCGACCGTGATGTCGGTGCAGCCGCTGATCGTCGGGCTGCT
GGTGTGGCCCGTGCTGGGGCGGCGCCCGCGTCCGGCACAACTGGTGGCGGCGCTGACCGGCTCGCTGGGGGTGGGGCTGC
TGATCCTCGGGCCGGCGGCGCGGCTCGACGCGATCGGTGTGGCCGCGGCCCTGGGCGCGGCGGTATCGATGGCGACCGGC
ACCGTGCTGATCGAACGCTGGGGCCGCGTCGGCTCGCCGCTGGCCCTGGCCGCGTGGCAACTGGCGCTGGGCGGGCTGGT
GCTGGTGCCGGTGGCGCTGGCAGTGGAGGGGCTGCCGCCCCTGCCCACGCTGCGCAATGCCGCCGGCTTTGCCTATCTGA
TCGTCATCGGTACGGCGCTGGGCTACTGGCTGTGGGTGCGCGGCATCGGCAGGCTCGGGGCGGACGTGACCTTTCTGTCG
CTGCTGAGTCCGCTGACGGCCACCGTGCTCGGTGCGCTGCTGCTGGGCGAGTGGTTCAGTCCGGTGCAGACCGCGGGTGC
ACTGCTGATCCTGGCGGCGACGGTATCGGGGATGGCGTTGTCGCGGCGCGCGCGCGTGGTGGGGACGCAGGACAACGCCG
CTGCGAGGCCGGTGCAGCCTGTGGCGCCTCGCGCCGGGGCGTCCAGGTGA

Protein sequence :
MASNRLITILATALAPCLWGTTYIVFTQTLPVSHPLLVGALRALPAGILLMLLGPGLPPRDKLGRLALVGVANIGVFFAL
LFVAAARLPGGVAATVMSVQPLIVGLLVWPVLGRRPRPAQLVAALTGSLGVGLLILGPAARLDAIGVAAALGAAVSMATG
TVLIERWGRVGSPLALAAWQLALGGLVLVPVALAVEGLPPLPTLRNAAGFAYLIVIGTALGYWLWVRGIGRLGADVTFLS
LLSPLTATVLGALLLGEWFSPVQTAGALLILAATVSGMALSRRARVVGTQDNAAARPVQPVAPRAGASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM ACN81012.1 PecM Not tested AbaR5 Protein 2e-09 50
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 1e-09 50
pecM AGK07028.1 PecM Not tested SGI1 Protein 1e-09 50
pecM AGK07086.1 PecM Not tested SGI1 Protein 1e-09 50