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Name : gspE (RCFBP_10322) Accession : YP_003744276.1 Strain : Ralstonia solanacearum CFBP2957 Genome accession: NC_014307 Putative virulence/resistance : Virulence Product : general secretory pathway protein e, type II secretion system Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 342725 - 344281 bp Length : 1557 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 10419967, 2124971; Product type t : transporter DNA sequence : ATGGCAACGCAAGCTTCTTCCCCCGACGCGCGCACGCTTGAGCCGCCCTCGCCCTCGGCGGTGCGGCTGGTGCCGTACGT GTTTGCGCGCGACGCCCGGCTGCTGGTCGCGCGACAGGATGTCGACACGCTCGAGGTGTGGGTCTGCCCCGAGACCTCGC GCACCGCGCTGGCCGAACTGGCCCGCGTGTTCGGTGCGCTGCGGCTGGTCAGCCTGGACGCCGCCGCGCTCTCCACCGCC ACGCAGACGGCCTACAACGCACAGGACGGCAGCGCCGCCCAGGTGGTCGGCGAGGTGGAAGGCGAGGTGGACCTGTCGCG CCTGATGCAGGACATCCCCGCCGTGGAAGACCTGCTCGAATCGGAAGACGACGCGCCGATCATCCGCATGATCAACGCGC TGCTGACGCAGGCCGCGCGCGAAGGCGCCTCGGACATTCACATCGAGCCGTTCGAGAACGCCTCGGTGGTGCGCTTCCGG GTGGACGGCACGCTGCGCGACGTGGTGCGCCCGAAGAAAGCGCTGCACGGCGCGCTGATCTCGCGCATCAAGATCATGGC GCAGCTCGACATCGCCGAGAAACGCCTGCCGCAAGACGGCCGCATCACGCTGCGCGTGGGCGGGCGGCCGGTGGACGTGC GCGTCTCCACCCTGCCCACCGGCCACGGCGAGCGCGCGGTGCTGCGCCTGCTCGACAAGGAGGCCGGACGGCTGGATCTC GGCAAGCTCGGCATGGGCGCCGGCACGCTGGCGCGTTTCGATCACCTGATCAACCAGCCGCACGGCATCGTGCTCGTCAC CGGCCCGACCGGGTCGGGCAAGACCACCACGCTGTATGCCGCGCTGTCGCGGCTCGATGCCAGCAGCACCAACATCATGA CGGTGGAGGACCCGATCGAGTACGACCTGGACGGCATCGGCCAGACCCAGGTCAACCCGAAGATCGACATGACCTTCGCC AAGGCCCTGCGCGCCATCCTGCGGCAGGACCCGGACGTGGTGATGATCGGTGAGATCCGCGACCTGGAGACCGCGCAGAT CGCCGTGCAAGCCTCGCTGACCGGCCACCTGGTGCTGGCCACGCTGCACACCAACGATTCGGCCTCGGCGGTGACGCGGC TGATCGACATGGGGATCGAGCCGTTCCTGCTGTCGTCGTCGCTGCTGGGCGTGCTGGCGCAGCGGCTGGTGCGGCGCCTG TGCGTACACTGCCGCCGCGAGGAGGTACTGGACCTCACGCCCACCGAGATCGAGGCCGTGGCCGGCACGCCGCCCGTGGA CAGCACCGCCGCCACCGTGCCGACGCGCCGCTCGGTGTGGCACCACGTCGGCTGCGAGCATTGCGGCCAGTCGGGCTACC AGGGCCGGACCGGCGTGTATGAGCTGCTCACGGTGACGCCCGAGATCCAGACCATGATCCACCGCCAGGCACCCGAGTCC GAGATCAAGGCGCTCGCCATCGGCCAGGGCATGCACACCATGCGCGCGGATGCGCAACGGTGGCTGGACGCGGGCGCGAC GTCGCTGGAAGAAGTGCTGCGCGTGACGCGTGACTGA Protein sequence : MATQASSPDARTLEPPSPSAVRLVPYVFARDARLLVARQDVDTLEVWVCPETSRTALAELARVFGALRLVSLDAAALSTA TQTAYNAQDGSAAQVVGEVEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQAAREGASDIHIEPFENASVVRFR VDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAGRLDL GKLGMGAGTLARFDHLINQPHGIVLVTGPTGSGKTTTLYAALSRLDASSTNIMTVEDPIEYDLDGIGQTQVNPKIDMTFA KALRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVLATLHTNDSASAVTRLIDMGIEPFLLSSSLLGVLAQRLVRRL CVHCRREEVLDLTPTEIEAVAGTPPVDSTAATVPTRRSVWHHVGCEHCGQSGYQGRTGVYELLTVTPEIQTMIHRQAPES EIKALAIGQGMHTMRADAQRWLDAGATSLEEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-105 | 51 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-105 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_003744276.1 | general secretory pathway protein e, type II secretion system | VFG0182 | Protein | 3e-116 | 54 |
| gspE | YP_003744276.1 | general secretory pathway protein e, type II secretion system | VFG1876 | Protein | 2e-108 | 52 |
| gspE | YP_003744276.1 | general secretory pathway protein e, type II secretion system | VFG2048 | Protein | 7e-106 | 50 |
| gspE | YP_003744276.1 | general secretory pathway protein e, type II secretion system | VFG0233 | Protein | 7e-79 | 47 |
| gspE | YP_003744276.1 | general secretory pathway protein e, type II secretion system | VFG0112 | Protein | 3e-76 | 45 |
| gspE | YP_003744276.1 | general secretory pathway protein e, type II secretion system | VFG2426 | Protein | 4e-68 | 43 |
| gspE | YP_003744276.1 | general secretory pathway protein e, type II secretion system | VFG1880 | Protein | 4e-75 | 43 |
