Gene Information

Name : kdsD (RCFBP_21075)
Accession : YP_003746836.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Virulence
Product : arabinose-5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 3024935 - 3025918 bp
Length : 984 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12805358; Product type e : enzyme

DNA sequence :
ATGATAGCGAATTTCAATCCGGATCGAGCGCTGGCCCTGGCCCAGCAGACCTTCGACATCGAAGCGCAGGCCGTGCTCGG
TCTCAAATCCCAGGTTTCCGCCGACTTTGCGCGCGCGGTCGAGATGGTGCTGCGCTGCACCGGCCGCGTGGTCGTGTCGG
GCATCGGCAAATCCGGCCACATCGCGCGCAAGGTGGCAGCCACGCTGGCGTCCACCGGCACGCCGGCGTTCTTCGTCCAC
CCGGCCGAAGCCAGCCACGGCGACCTCGGCATGGTGACGCGCGACGACGTCTTCATCGGCTTCTCCAATTCGGGCGAAGT
GTCCGAGCTGACCGCCATCCTGCCGCTCATCAAGCGCCTGGGCGCCAAGCTGATCGCTGTGACGGGCAATCCGCAATCGT
CGCTGGCGCAGCACGCCGACGTCGTGCTGAACTCGCGTGTCGAGGTCGAGGCCTGCCCGCTCAACCTGGCACCGACCGCC
AGCACCACCGCGCAGATGGCGCTGGGCGACGCGCTGGCCGTGGCCTTGCTCGACGCGCGCGGCTTCGGCGCGGACGACTT
CGCCCGCTCGCACCCCGGCGGCTCGCTCGGCCGCAAACTGCTCACGCACGTGCGCGATGTGATGCGCCAGGGCGAGGCCG
TGCCGCGCGTGGCCGAAGACACGCCGCTGTCGCAGGCGCTGATGGAAATCACCCGCAAGGGCATGGCGATGACCGCCGTG
GTCGACGCCGAAGGCCGTGCCGCCGGCGTCTTCACCGACGGCGACCTGCGCCGCCTGCTGGAAACCCCGCGCGACTGGCG
CGCCGTGCCGATCCACGAGGTGATGCACCGCAACCCGCGCGCGGTCGGCCCCGACCAACTGGCAGTCGAGGCGGTCGAAA
TGATGGAAACGCACCGCATCAACCAGTTGCTGGTGGTGGACGCCGCCGGGCAGCTGATCGGCGCGCTGCATATCCATGAC
CTGACCCGCGCCAAGGTCATCTGA

Protein sequence :
MIANFNPDRALALAQQTFDIEAQAVLGLKSQVSADFARAVEMVLRCTGRVVVSGIGKSGHIARKVAATLASTGTPAFFVH
PAEASHGDLGMVTRDDVFIGFSNSGEVSELTAILPLIKRLGAKLIAVTGNPQSSLAQHADVVLNSRVEVEACPLNLAPTA
STTAQMALGDALAVALLDARGFGADDFARSHPGGSLGRKLLTHVRDVMRQGEAVPRVAEDTPLSQALMEITRKGMAMTAV
VDAEGRAAGVFTDGDLRRLLETPRDWRAVPIHEVMHRNPRAVGPDQLAVEAVEMMETHRINQLLVVDAAGQLIGALHIHD
LTRAKVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 1e-57 47
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-57 47
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-57 46