Gene Information

Name : RCFBP_20925 (RCFBP_20925)
Accession : YP_003746691.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Virulence
Product : response regulator, chey family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2865950 - 2866648 bp
Length : 699 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : regulator

DNA sequence : 
ATGCGCATCCTGATTGCTGAAGACGACGCCACGCTGGCCGACGGGCTGACCCGTTCGCTGCGCCAGGCCGGCTATGCCGT
CGACCGTGCTGCCGATGGCGCCGCCGCCGACGCGGCCCTTTCCGCGCAGACCGCGCAGACCTACGACCTGCTGATCCTCG
ATGTCGGGCTGCCGCGCCTGTCCGGCCTGGAGGTGCTCAAGCGCCTGCGCTCGCGCGGGGCGATGCTGCCGGTGCTGATC
CTGACCGCCGCCGATAGCGTGGACGAGCGCGTCAAGGGATTGGACCTGGGCGCCGACGACTACATGGCCAAACCCTTCGC
GCTGTCCGAGCTGGAGGCGCGCGTGCGGGCGCTGGTGCGGCGCGGCACCGGCGGCGGCGCCACGCTGGTCCGCCACGGAC
CGCTGGCGTTCGACCAGGTCGGGCGCATCGCTTACATCCACGACCAGGTGGTGGATCTGTCGGCGCGGGAGATCGGGCTG
CTGGAGATCCTGCTGTCGCGCGCCGGCCGGCTGGTGTCGAAAGAACAGTTGGTCGACCACCTGTGCGGCTGGGGCGAGGA
GGTCAGCAACAACGCGATCGAGGTCTACGTGCACCGGCTGCGCAAGAAGATCGAGGTGGATGGCATCCGCATCGCCACCG
TGCGCGGGCTCGGCTACTGCCTGGAACGCGCCCCCGTGCCGGCGGTCGCCCATGGGTGA

Protein sequence : 
MRILIAEDDATLADGLTRSLRQAGYAVDRAADGAAADAALSAQTAQTYDLLILDVGLPRLSGLEVLKRLRSRGAMLPVLI
LTAADSVDERVKGLDLGADDYMAKPFALSELEARVRALVRRGTGGGATLVRHGPLAFDQVGRIAYIHDQVVDLSAREIGL
LEILLSRAGRLVSKEQLVDHLCGWGEEVSNNAIEVYVHRLRKKIEVDGIRIATVRGLGYCLERAPVPAVAHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCFBP_20925 YP_003746691.1 response regulator, chey family BAC0638 Protein 2e-25 47
RCFBP_20925 YP_003746691.1 response regulator, chey family BAC0083 Protein 6e-31 46
RCFBP_20925 YP_003746691.1 response regulator, chey family NC_002516.2.879194.p Protein 6e-28 46
RCFBP_20925 YP_003746691.1 response regulator, chey family BAC0487 Protein 2e-33 45
RCFBP_20925 YP_003746691.1 response regulator, chey family BAC0308 Protein 8e-28 44
RCFBP_20925 YP_003746691.1 response regulator, chey family BAC0197 Protein 1e-28 44
RCFBP_20925 YP_003746691.1 response regulator, chey family BAC0347 Protein 2e-28 41
RCFBP_20925 YP_003746691.1 response regulator, chey family BAC0111 Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCFBP_20925 YP_003746691.1 response regulator, chey family VFG0473 Protein 1e-32 46
RCFBP_20925 YP_003746691.1 response regulator, chey family VFG1390 Protein 3e-30 44
RCFBP_20925 YP_003746691.1 response regulator, chey family VFG1386 Protein 8e-25 41