Gene Information

Name : ribD (RCFBP_20698)
Accession : YP_003746473.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Unknown
Product : bifunctional protein: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 2656933 - 2658045 bp
Length : 1113 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9068650; Product type e : enzyme

DNA sequence :
ATGTTTTCCGATTTCGACCACGTCATGATGCAGCGCGCCCTGGCGCTGGCGGAAAACGGACTCTTCACCACCACGCCCAA
CCCTCGCGTCGGCTGCGTGCTGGTCCGGGACGACACCATCATCGGCGAAGGCTTCACCCAGCCGCCCGGCCAGGACCATG
CCGAAATCCAGGCCATCAAGGACGCCCAGGCGCGCGGCCATGACGTGCGCGGCGCCACCGCTTATGTGACGCTGGAGCCG
TGCAGCCATTTCGGCCGCACCCCCCCCTGCGCGGACCGCCTGGTCGAGGCCGGCATCGCGCGCGTAGTGGCGGCCATGGA
GGACCCGAACCCAGCCGTCTCGGGGCGCGGTCTGCAAAAGCTGCGCGAAGCCGGCATCGACGTCCGCTGCGGCCTGCTGG
AACGCGAGGCGCGAGAACTGAACATCGGCTTCGTCTCGCGCATGACGCGCGGCACGCCGTGGGTGCGCGTCAAGGTGGGG
GCATCGCTGGATGGCCGCACCGCGCTGGACAACGGCGTCAGCCAGTGGATCACGGAGGCCGAGGCACGCAACGACGGCCA
CCGCTGGCGCGCGCGCGCCTGCGCCATCCTCACCGGCATCGGCACGGTGCGCGAGGACAACCCGCGCCTGACCGTGCGCG
CCATTCCCACGCCGCGCCAGCCGCGCCGCATCCTGATCGATTCGGGGTTGGACGTGCCGCTCGATGCGCATATCCTGAGC
GCCGACGACCACCGTGAGCCGACGCTGATCTTCGCCGCCCGCCCCGAAGCCGGCCGCATGCGCGCGCTGGCTGAGCACGG
CGCCGAGGTGATCCTGCTGCCCAATGCCGACGGCAAGGTCGACCTGCCCGCCATGCTGCGCGAACTCGGCCGCCGCGAAA
TCAACGAGCTGCACGTCGAAGCCGGCTACAAGCTCAACGGCTCGCTGCTGCGCGAAGGGCTGGTCGACGAGATCCTCGTC
TACCTGGCGCCCAAGGTCCTGGGATCGGGGCAGGGCATGTTCAATCTGGGACCGCTGCAATCGCTGGAAGGTGCGGCGGA
ATTCTTCTTTCACGACATCACGCGCGTCGGCGGCGATCTCCGCATCCTGGCGCGCCGCAATCCGACGGACTGA

Protein sequence :
MFSDFDHVMMQRALALAENGLFTTTPNPRVGCVLVRDDTIIGEGFTQPPGQDHAEIQAIKDAQARGHDVRGATAYVTLEP
CSHFGRTPPCADRLVEAGIARVVAAMEDPNPAVSGRGLQKLREAGIDVRCGLLEREARELNIGFVSRMTRGTPWVRVKVG
ASLDGRTALDNGVSQWITEAEARNDGHRWRARACAILTGIGTVREDNPRLTVRAIPTPRQPRRILIDSGLDVPLDAHILS
ADDHREPTLIFAARPEAGRMRALAEHGAEVILLPNADGKVDLPAMLRELGRREINELHVEAGYKLNGSLLREGLVDEILV
YLAPKVLGSGQGMFNLGPLQSLEGAAEFFFHDITRVGGDLRILARRNPTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-58 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-58 44