|
Name : insD (RCFBP_20551) Accession : YP_003746334.1 Strain : Ralstonia solanacearum CFBP2957 Genome accession: NC_014307 Putative virulence/resistance : Unknown Product : is2 insertion element transposase insab'; cp4-44 prophage Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2507905 - 2508753 bp Length : 849 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme DNA sequence : GTGAAGCAGGTTTGCGAGGTCCTCGGCGTAGCGCGCTCAAACGTGGCGACCAAGCTCGCTCGACCTGCTGATTGGCGTGA TGGGCGCTCGGCCCGACAAACGGACGACACTGGCCTGGTGGACGAAATCCGGCGCGTCGTCGCCGACTTGCCAAGCTATG GCTACCGTCGGGTCTGGGGCCGATTGCGGCGCGAACGTGAGCGTCGAAGCGAGGCGCCGGTCAATGCCAAGCGGGTCTAC CGGGTCATGCGCACGCACGGCCTGTTGCTGGAGCGCAGGCCGACGCCACCGCGCCCACAGCGTCGGCATGACGGCAAGGT CGCTGTAGCCAAGAGCAACCAGCGCTGGTGCTCGGACGGGTTCGAGTTCCGCTGCGACGACGGCGAGCCGTTGCGCGTGA CGTTCGCATTGGATTGTTGCGACCGCGAGGCGATGAGCTGGGTGGCGAGCACCGGTGGCTACAGTGGCGACGTCGTGCGC GACGTGATGCTGGCGGCCGTCGAGCAGCGCTTCGGCAATGTTCCGAAAGCACCGGAGCAAATCGAATGGCTGACGGACAA CGGCTCAGGCTACATTGCCGGGAAGACCCGCGAGTTCGCCACGGACATTGGCCTGAAGCCGTTGACGACGCCAGTGTGCA GCCCGCAGAGTAACGGCATGGCGGAGAGCTTCGTGAAGACGATGAAGCGCGACTACGTTGCCTTCATGCCGAAGCCTGAT GCCGCAACAGCCTCGCGCAACCTCGCCATCGCGTTCGAGCACTACAACGAGCAGCATCCCCATAGCGCGCTGAAATACCG CTCGCCACGCGAGTTCAGGCGCAGGACGGAATCATCAACTCAAGTGTGA Protein sequence : MKQVCEVLGVARSNVATKLARPADWRDGRSARQTDDTGLVDEIRRVVADLPSYGYRRVWGRLRRERERRSEAPVNAKRVY RVMRTHGLLLERRPTPPRPQRRHDGKVAVAKSNQRWCSDGFEFRCDDGEPLRVTFALDCCDREAMSWVASTGGYSGDVVR DVMLAAVEQRFGNVPKAPEQIEWLTDNGSGYIAGKTREFATDIGLKPLTTPVCSPQSNGMAESFVKTMKRDYVAFMPKPD AATASRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESSTQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpF | AAD44739.1 | TnpF | Not tested | SHI-2 | Protein | 2e-66 | 64 |
| unnamed | AAL67379.1 | transposase-like protein | Not tested | PAI II CFT073 | Protein | 1e-66 | 64 |
| SF2985 | NP_708759.1 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 4e-65 | 64 |
| unnamed | CAC39284.1 | hypothetical protein | Not tested | LPA | Protein | 3e-68 | 63 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 5e-71 | 63 |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 1e-70 | 62 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 1e-70 | 62 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 1e-70 | 62 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 9e-71 | 62 |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 6e-71 | 62 |
| ECO111_3773 | YP_003236109.1 | putative IS2 transposase InsAB | Not tested | LEE | Protein | 2e-69 | 61 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 5e-70 | 61 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 6e-65 | 57 |
| c5197 | NP_757045.1 | transposase insD | Not tested | PAI II CFT073 | Protein | 6e-41 | 52 |
| insD | YP_854263.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 7e-43 | 52 |
| insD | AAZ04432.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 6e-43 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| insD | YP_003746334.1 | is2 insertion element transposase insab'; cp4-44 prophage | VFG0649 | Protein | 2e-65 | 64 |
| insD | YP_003746334.1 | is2 insertion element transposase insab'; cp4-44 prophage | VFG0608 | Protein | 5e-71 | 62 |
| insD | YP_003746334.1 | is2 insertion element transposase insab'; cp4-44 prophage | VFG1732 | Protein | 4e-71 | 62 |
| insD | YP_003746334.1 | is2 insertion element transposase insab'; cp4-44 prophage | VFG0621 | Protein | 5e-71 | 62 |
