|
Name : RCFBP_20548 (RCFBP_20548) Accession : YP_003746331.1 Strain : Ralstonia solanacearum CFBP2957 Genome accession: NC_014307 Putative virulence/resistance : Unknown Product : transposase of insertion sequence isrta2, is256 family Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 2505916 - 2507166 bp Length : 1251 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin DNA sequence : ATGCCTCGCAAACCGAAAGCCAAACCTGTGGACCTGCCGGCGATTCCCGCTGAACTGCTCGAGCAGTTCGGCAGCGGCCC GATGACGGCCGAAGCCATCAATGCCGCGACGCTGGCCCTCAAGAAGGCGTTGATTGAGCGGGCACTGGGCGGCGAGATGA ATCACCATCTCGGCTATCCGCCAGGTGCGGCCAAACCGGCCACCGTTACCAACCAGCGTAACGGTTCAGGCGCCAAGACG GTTCTGACCGAGGACGGTCCGATCCGCATCGAGGTGCCGCGAGACCGTGACGGCAGCTTCGAACCGCTGCTCATTCCCAA ACACGAGCGACGCTTCAAGGGCTTCGACGACAAGATCGTCGCCATGTATGCCCGGGGCATGACCGTGCGCGAGATTCAGG GCTTCCTGCTGGAGCAATATGCAACGGAAGTCTCGCCCGAGTTCATCAGCTCGGTCACCGATGAGGTGATGGCCGAAGTC ACCGCCTGGCAGGCCCGGCCACTCGATCCCATGTATCCGGTCGTGTTCTTCGACGCGCTGCGGGTCAAGATCCGGGAGGA CGCCGTGGTACGCAACAAGGCCGTCTATCTGGCGCTGGGAGTGCTGCCCGACGGCACGCGTGACATTCTGGGCCTGTGGA TCGAAAACACCGAAGGCGCCAAGTTCTGGATGAAGGTGTTCAACGATCTCAAGACGCGCGGGGTCAATGACATCCTGATC GCCGTGACGGACGGCCTCAAGGGCATGCCCGAAGCGCTGGCGGCCGTGTTTCCGGCGACCACGCTGCAGACCTGCATCGT TCACCTGATCCGCAACAGCCTCGACTATGCGAGCTGGAAGGACCGTAGGGCGCTGGCTGCCGCGATTCGGCCGATCTACA CAGCCCCGAGCGCGGAGGCCGCACAGGCCGAGCTCGAAGCGTTTGCCGACGGCCCGTGGGGACAGAGATACCCGACGGTC AGCGCCGCCTGGCGCAACGCCTGGGATCGCGTGATTCCGTTCTTTGCGTTCCCACCGGCGGTACGCAAGGTGATTTACAC GACGAACGCCATTGAGAACATCAACGCGCAGCTACGCAAGATCATCAAGACCCGAGGCCACTTCCCGACCGACGATGCAG CGATGAAGCTCATCTGGCTCGCACTGCGCAACATCACGGCGGGTTGGAGCCGTGCCGCTCACGATTGGAAGCAGGCCACG AATCAATTCGCTATCCTCTACGCCGATCGATTCGTTCGACCATCCGTGTGA Protein sequence : MPRKPKAKPVDLPAIPAELLEQFGSGPMTAEAINAATLALKKALIERALGGEMNHHLGYPPGAAKPATVTNQRNGSGAKT VLTEDGPIRIEVPRDRDGSFEPLLIPKHERRFKGFDDKIVAMYARGMTVREIQGFLLEQYATEVSPEFISSVTDEVMAEV TAWQARPLDPMYPVVFFDALRVKIREDAVVRNKAVYLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGVNDILI AVTDGLKGMPEALAAVFPATTLQTCIVHLIRNSLDYASWKDRRALAAAIRPIYTAPSAEAAQAELEAFADGPWGQRYPTV SAAWRNAWDRVIPFFAFPPAVRKVIYTTNAIENINAQLRKIIKTRGHFPTDDAAMKLIWLALRNITAGWSRAAHDWKQAT NQFAILYADRFVRPSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 6e-85 | 45 |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 2e-92 | 45 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 3e-82 | 44 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 7e-81 | 44 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 4e-79 | 43 |
