Gene Information

Name : RCFBP_20544 (RCFBP_20544)
Accession : YP_003746328.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Unknown
Product : isrso14-transposase orfa protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2503445 - 2503705 bp
Length : 261 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
ATGAAGAAGCGATTCACCGAAGAGCAGATTATTTGCGTGCTGAAGGAAGCCGAGGCAGGCCTGAAGCCAGCAGAGCTGTG
CCGCAAGCACGGCATCTCGGAAGCGACCTACTACAACTGGAAGGCGAAGTTCGGCGGGATGACGGTCTCCGAAGCGCAGC
GCCTGAAGGAGCTGGAGCAGGAGAACAACAAGCTCAAGCGCTTGCTGGCCGAATCGATGCTGGATAACGCCGCGCTGAAG
GACCTGCTGTCTCGAAAGTAG

Protein sequence :
MKKRFTEEQIICVLKEAEAGLKPAELCRKHGISEATYYNWKAKFGGMTVSEAQRLKELEQENNKLKRLLAESMLDNAALK
DLLSRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-22 65
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-22 65
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-22 65
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 3e-22 64
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 3e-18 52
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 6e-17 51
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 4e-17 51