|
Name : RCFBP_20543 (RCFBP_20543) Accession : YP_003746327.1 Strain : Ralstonia solanacearum CFBP2957 Genome accession: NC_014307 Putative virulence/resistance : Unknown Product : isrso14-transposase orfb protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2502582 - 2503406 bp Length : 825 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme DNA sequence : ATGACCGAACGCGCCATGGGTGTCACCCGGGCCTGCGGGCTGGTAGGGATTTCGCGCTCGCTGTTTCACTACGAATCGCG GCGCCGAGTCGACGACGAAGCGCTGACTGGCCGGATGATGGCCATCACCGCGCAGAAGCGCCGCTACGGCTATCGCCGGA TTCACGTGCTGTTGCAGCGGGAGGGCTGGCTGGCCAACCACAAGCGCATTTGGCGCCTGTACAGCAAGGCGGGGCTGAGC GTGCGCAAGCGGCGACGCAAGCGCATTGCGGCTGTCGAACGCAAGCCGCTGCCGGTGCCAACGGGCCCAAACCAGAGCTG GTCGATGGACTTTGTTTCCGACGGGCTGGCCTATGGTCGGCGGTTTCGCTGCCTGAACGTGGTCGACGATTACACGCGCG AATGCGTGGCTATCGAGGTTGATACCTCGTTGCCGGGCTTGCGAGTGAAGCAAGTGCTTGAACGGCTGAAGGATATGCGA GGCTTGCCCGCGTCCATCACGGTGGACAACGGTCCGGAGTTCGCTGGTAAGGTGCTGGACGCATGGGCCTACGAGGCGGG CGTCACGCTGTCGTTCATCCGGCCCGGCAAGCCAGTGGAGAACGCCTACATCGAGAGCTTCAACGGGCGGTTCCGCGATG AGTGCCTGAACGAGCACTGGTTCGTCTCAATGCGCCACGCCAGGCAGCTGATTGAGGAATGGCGTATCGAGTACAACACC GAGCGGCCTCACAGTTCGCTCGGCTACATGACCCCGGTGCAGTTCGCGCAGGGACATGAGCAGAAAGAGTTTTTAACCTC GGACTCTACCTGCGCTTCGTACTAG Protein sequence : MTERAMGVTRACGLVGISRSLFHYESRRRVDDEALTGRMMAITAQKRRYGYRRIHVLLQREGWLANHKRIWRLYSKAGLS VRKRRRKRIAAVERKPLPVPTGPNQSWSMDFVSDGLAYGRRFRCLNVVDDYTRECVAIEVDTSLPGLRVKQVLERLKDMR GLPASITVDNGPEFAGKVLDAWAYEAGVTLSFIRPGKPVENAYIESFNGRFRDECLNEHWFVSMRHARQLIEEWRIEYNT ERPHSSLGYMTPVQFAQGHEQKEFLTSDSTCASY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 2e-51 | 56 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 3e-67 | 52 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 4e-50 | 50 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 9e-37 | 50 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 1e-46 | 42 |
