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Name : RCFBP_20500 (RCFBP_20500) Accession : YP_003746289.1 Strain : Ralstonia solanacearum CFBP2957 Genome accession: NC_014307 Putative virulence/resistance : Unknown Product : glycolate/lactate permease (lctp family) Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 2462295 - 2463980 bp Length : 1686 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter DNA sequence : ATGTGGAATCAAGTCTATGACCCGCTCGGCAACGCCGTGTGGTCGACCGTCGCGGCCGGGTTGCCGGTGGCGGTGCTGCT CTGTTCGCTCGCGTTCTTCCACATGCAGGCGCACTTGGCCGCGGGGCTGGCGCTGATCGTGGGCGTGAGCGTCGCCGCGT TCGTGTTCGGCATGCCGGCGGCGATGGCGGGCAAGGCGGCCGGCCTGGGCATCGTGTCCGGCCTGTTCCCGATCGGCTGG ATCGTCCTCAACATCATCTTCCTGCACCGGCTCACCACCCTGAACGGCTCGTTCAAGGTGCTGCAGAGCTCGATCTCGGG CATCACCGAAGACCGCCGCCTGCAACTGCTGCTGGTGGCGTTCAGCTTCGGCGCGTTCTTCGAGGGCGCGGCGGGCTTCG GCACACCGGTGGCCGTGACGGGCGCGATCCTGATCGGCCTGGGCTTCTCGCCGCTGGCGGCCTCGGGCCTGGCGCTGATC GCCAACACCGCACCGGTGGCCTATGGCGCCCTGGGCGCGCCCGTCATCGGGCTGGCCGCGGTAACGGGACTGGACCTGAA AGACCTCTCCGCCATGATCGGCCGCCAGTTGCCGTTCTTCTCGGTGCTGGTGCCCTTCTGGCTGATCTGGGCGTTCGCGG GTTTTCGCGGCATGCTGCAGATCTGGCCGGCGATCCTGGTGGCGGGCGTGACCTTCGCCGTCCCGCAGTTCCTGGTGTCC AACTTCCACGGTCCGTGGCTGGTGGATGTGATCGGCGCGCTGATTTCGATGGGCTCGCTCACCCTGTTCCTGAAAGTGTG GAAGCCCAAGACCATCTGGACCTCCACCGCCCTGCGCAAGCACCCCGACAACTCCAAGGTCGATCCCGAAGCCGCCGCCG AGGCGCGTGCCGCCATCGCCGTCGGCGACGTGACCATCAGCCGCATGCAGGCGTGGCTGCCCTGGGTGATCCTGACCGTG TTCGTCTTCATCTGGGGCGTGCCGCAGTTCAAGGCCTTCGTCGACGGCCTGTGGCAGTTCAAGCTCCCCATCCCCGGGCT CGACAAGATGGTGCTCAAGGGCCCGCCGGTCGTGCCCAAGGTCACGGCCGAAGGCGCGGTATTCACCTTCAACGTGCTGT CGATGGCGGGCACGGGCATCCTGGCATCGGCCATCGTCGGCGGCCTGCTGATGGGCTATTCGGTGCCACGCATGGTCAAG GAGTACTGGAACACCATCAAGCTGACGCGCTATTCGCTGCTGACCATCTGCGCGATGTTCGGCATCGGCTACCTGACCCG CTACTCGGGCCTGGACGCAACGCTGGGCCTGGCGTTTGCCCACACCGGCGTGCTGTACCCGCTGTTCGGCACCATGCTGG GCTGGCTGGGCGTGGCGCTCACCGGTTCGGACACGGCATCGAACGTGCTGTTCGGCGGCCTGCAGAAGACCACCGCCGAG CAGCTCGGCCTGTCGCCGATCCTGATGTCGGCCGCCAACAGCTCGGGCGGAGTGATGGGCAAGATGATCGACGCGCAATC CATCGTGGTCGCCTCCACTGCCACCAAGTGGTACGGACACGAGGGCGACATCCTGCGCTATGTGTTCTTCCACTCGATCG CGTTGGCCTTCCTGGTGGGCCTGATGATCACGCTGCAGGCCTACGTAGAACCGTTCACACGGCTGGTGGTGCCGATGGTT CGATAG Protein sequence : MWNQVYDPLGNAVWSTVAAGLPVAVLLCSLAFFHMQAHLAAGLALIVGVSVAAFVFGMPAAMAGKAAGLGIVSGLFPIGW IVLNIIFLHRLTTLNGSFKVLQSSISGITEDRRLQLLLVAFSFGAFFEGAAGFGTPVAVTGAILIGLGFSPLAASGLALI ANTAPVAYGALGAPVIGLAAVTGLDLKDLSAMIGRQLPFFSVLVPFWLIWAFAGFRGMLQIWPAILVAGVTFAVPQFLVS NFHGPWLVDVIGALISMGSLTLFLKVWKPKTIWTSTALRKHPDNSKVDPEAAAEARAAIAVGDVTISRMQAWLPWVILTV FVFIWGVPQFKAFVDGLWQFKLPIPGLDKMVLKGPPVVPKVTAEGAVFTFNVLSMAGTGILASAIVGGLLMGYSVPRMVK EYWNTIKLTRYSLLTICAMFGIGYLTRYSGLDATLGLAFAHTGVLYPLFGTMLGWLGVALTGSDTASNVLFGGLQKTTAE QLGLSPILMSAANSSGGVMGKMIDAQSIVVASTATKWYGHEGDILRYVFFHSIALAFLVGLMITLQAYVEPFTRLVVPMV R |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 5e-91 | 46 |
