Gene Information

Name : dnaB (RCFBP_20115)
Accession : YP_003745917.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 2080364 - 2081785 bp
Length : 1422 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10404597, 6323420; Product type e : enzyme

DNA sequence :
ATGAATGCGCCGCGCCGCTATAATCCCGCCATGAACGCGCCGACCGATCCCCAGCTCGAATCCCTTAAGGTCCCGCCGCA
TTCCATCGAGGCCGAGCAGTCGGTGCTCGGCGGCCTGCTGCTGGACAACGCCGCGTGGGATCGCATCGCCGACTTCATCA
ACGAATTCGATTTCTACCGCTACGACCACCGGCTGATCTTCCACAACATCGGCAAGCTGATCTCGCAGGCCAAGCCGGCC
GACGTGATCACGGTGTACGAGCAGCTGCAGGCGGCGGGCAAGGCGGAAGAGGTCGGTGGCTTGGCCTACCTGAACGCGCT
GGCGCAGAACACGCCGAGCGCGGCCAACATCCGCCGCTATGCCGAAATCGTTCGCGATCGCGGCGTGTTGCGCCAGTTGG
TGACGATTGCCGACGAGATTTCCGCCGGGGCCTTCAACCCGCAGGGCCGCGACGTGCGCCAACTGCTGGACGAGGCCGAG
TCGAAGGTGTTCGCGATTGCCGAAGAGGGCGCGCGCGGACAGAAGGGCTTCCTGGAGATCCAGCCGCTGCTGACGCAGGT
GGTCGAACGCATCGACGAGTTGTACCACCGCGATAGCCAGAACGACATCACCGGCGTGCCGACCGGTTTCGTCGACCTGG
ACCGCATGACCAGCGGCATGCAGGGCGGCGACCTGATCATCGTGGCCGGGCGCCCCTCGATGGGTAAGACGGCATTCTCG
CTCAACATCGGTGAGCACGTGGCGGTGGAGCAGGGCCTGCCGGTGGCGGTGTTCTCGATGGAAATGGCGGGCACGCAGTT
GGCGATGCGGATGCTGGGTTCGGTCGGCCGGCTCGACCAGCACCGCCTGCGCACGGGTCGCCTGCTCGACGAGGACTGGC
CGCGCCTGACGCATGCCATCCAGAAGATGAACGACGCGCAGCTGTTCATCGACGAGACGCCGGCGCTGAACCCCATGGAA
CTGCGCGCGCGCTCGCGACGGCTGGCCCGACAGTGCGGGCAGCTTGGCCTGATCATCATCGACTACCTGCAGCTGATGTC
GGGATCGGGTAGCGGCGGCGAGAACCGCGCGACCGAGATTTCGGAAATCTCGCGTTCGCTCAAGGGCCTGGCCAAGGAGC
TCAACTGCCCGGTGATCGCACTGTCGCAGTTGAACCGGAGCCTGGAACAGCGTCCCAACAAGCGCCCCGTGATGTCGGAC
TTGCGCGAATCCGGCGCCATCGAACAGGACGCCGACGTGATCCTGTTCATCTACCGCGACCAGGTCTACAACCCCGACTC
CCAGGACAAGGGTACCGCCGAAATCATCATCGGCAAGCAGCGTAATGGCCCGATCGGTACAGTCCGGCTGACGTTCCTGG
GCGAATACACGAAGTTCGACAACTTCACCGGCGGCAACGCCTTCTTCGACAACGATACCTGA

Protein sequence :
MNAPRRYNPAMNAPTDPQLESLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFINEFDFYRYDHRLIFHNIGKLISQAKPA
DVITVYEQLQAAGKAEEVGGLAYLNALAQNTPSAANIRRYAEIVRDRGVLRQLVTIADEISAGAFNPQGRDVRQLLDEAE
SKVFAIAEEGARGQKGFLEIQPLLTQVVERIDELYHRDSQNDITGVPTGFVDLDRMTSGMQGGDLIIVAGRPSMGKTAFS
LNIGEHVAVEQGLPVAVFSMEMAGTQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQLFIDETPALNPME
LRARSRRLARQCGQLGLIIIDYLQLMSGSGSGGENRATEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSD
LRESGAIEQDADVILFIYRDQVYNPDSQDKGTAEIIIGKQRNGPIGTVRLTFLGEYTKFDNFTGGNAFFDNDT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-108 54
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 9e-94 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-93 50
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-88 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 6e-91 47
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 7e-92 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-88 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-88 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 9e-73 45