Gene Information

Name : RCFBP_20053 (RCFBP_20053)
Accession : YP_003745858.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Unknown
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 2013745 - 2015625 bp
Length : 1881 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter

DNA sequence :
GTGACCGCAGCCAACCCGCAGACCACCATCGCGATGCCGGAGCCGCGCATCGTGCAGGTGCAGGACCTGAGCGTGCGCTT
TGCCACGTCCGAGCGCGTGGTCGACGCGGTGCGTGGCCTGTCGTTCCACGTCGATCGCGGCGAGACGTTGGCGGTGGTGG
GCGAATCGGGCTCGGGCAAGTCGGTGACCTCGCTCGCGCTGATGCGGCTGGTGGAGCACGGCGGCGGCCGGATCGTCGGC
GGGCAGATGCACCTGCGCCGGCGCGGCGGCGAGCTGCTCGACCTGGCCAACGCCAGCCAGGCCGCCATGCGCGGCGTGCG
CGGCGCCGACATCGCCATGATCTTCCAGGAGCCGATGACCTCGCTCAACCCGGTCTTCCCGGTGGGCGAGCAGATCGCCG
AATCGATCCGGCTGCACCAGGGCAAATCGCGCGGCGAGGCCCGTGCCGAGGCACTGCGCATGCTGGAGCAGGTGCGCATT
CCCGAGGCGCGGCGGGTGCTGGCGCGCTATCCGCACCAGCTCTCGGGCGGCATGCGCCAGCGCGTGATGATCGCGATGGC
GCTGTCGTGCCGGCCGTCGCTGCTGATCGCCGACGAGCCGACCACGGCGCTGGACGTGACCATCCAGGCCGAGATCCTGC
AGCTGATCCGAGCGCTGCAGCAGGAGATGCGGATGGCGGTTGTCTTCATCACGCACGACATGGGCGTGGTGGCGGAGGTG
GCCGACCGCGTGCTCGTCATGTACAAGGGCGAGCGCGTGGAGGAGGGGCCGTCGGCCACGGTGTTCGCGCAGCCGGCGCA
TCCGTACACGCGCGCGCTGCTGTCGGCGGTGCCGCGGCTGGGCGCGATGGCGGGCACCGATGGCCCGGCGCGCTTTCCGT
TGATGCGCGTGGATGGCACCGGCGTGCCGGTCGACACGGCGCCGCAGCCGGCCGTGCCGCACGCCGGGCAGCCGATCCTG
CGCGTGCGCGACCTGGTGACGCGCTTCGATGTGCCGAGCGGGCTGTTCGGCCGGGTCACGCGGCGCGTGCATGCGGTGGA
GCAGGTCAGCTTCGATCTGTACCCTGGCGAGACGCTGGCGCTGGTGGGCGAATCGGGCTGCGGCAAGTCGACCACGGGAC
GGTCGCTGCTGCGCCTGGTGGACAGCCAGAGCGGCAGCATCGAGTTCGCCGGCCAGAACATCGGCGCGCTCAAGGGGCAT
GCGCTGCAGACGCTGCGGCGGAACATCCAGTTCATCTTCCAGGACCCGTTTGCCTCGCTGGACCCGCGCGTGCCGGTCGG
CTACTCGATCATGGAGCCGCTGCTGGTGCACCGGGTGGCCTCCGGCCGGCAGGCGCAGGAACGCGTCGAATGGCTGCTCG
ACAAGGTCGGCCTGCAGGCGGCGCACGCGGCGCGCTATCCGCACGAATTCTCGGGCGGCCAGCGGCAGCGCATCTGCATC
GCGCGGGCGCTGGCGCTGAACCCGAAGGTGGTGATCGCCGACGAGTCGGTCTCGGCGCTGGACGTGTCGATCCAGGCGCA
GATCGTCAACCTGATGCTCGACCTGCAGAAAGAATTCGGCATCGCCTTCCTGTTCATCTCGCACGACATGGCGGTGGTGG
AGCGCATCAGCCACCGCGTGGCGGTGATGTACCTGGGCCAGATCGTCGAGATCGGCCCGCGCCGGGCGATCTTCGAGAAC
CCGCAGCATCCGTACACGAAGAAGCTGATGTCGGCGGTGCCGATCGCGGACCCGGCGCGCCGGCACCTCAAGCGCGAGCT
TTCCACGCACGAGATTCCCAGCCCGATCCGCGCCCTCGGCGATGCGCCGGTGGTGCGGCCGTTGGAGCAAGTGGCGCCAG
ACCACTTTGTCGCCCGCCATGCGATCGGCGGCGCTTATTGA

Protein sequence :
MTAANPQTTIAMPEPRIVQVQDLSVRFATSERVVDAVRGLSFHVDRGETLAVVGESGSGKSVTSLALMRLVEHGGGRIVG
GQMHLRRRGGELLDLANASQAAMRGVRGADIAMIFQEPMTSLNPVFPVGEQIAESIRLHQGKSRGEARAEALRMLEQVRI
PEARRVLARYPHQLSGGMRQRVMIAMALSCRPSLLIADEPTTALDVTIQAEILQLIRALQQEMRMAVVFITHDMGVVAEV
ADRVLVMYKGERVEEGPSATVFAQPAHPYTRALLSAVPRLGAMAGTDGPARFPLMRVDGTGVPVDTAPQPAVPHAGQPIL
RVRDLVTRFDVPSGLFGRVTRRVHAVEQVSFDLYPGETLALVGESGCGKSTTGRSLLRLVDSQSGSIEFAGQNIGALKGH
ALQTLRRNIQFIFQDPFASLDPRVPVGYSIMEPLLVHRVASGRQAQERVEWLLDKVGLQAAHAARYPHEFSGGQRQRICI
ARALALNPKVVIADESVSALDVSIQAQIVNLMLDLQKEFGIAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAIFEN
PQHPYTKKLMSAVPIADPARRHLKRELSTHEIPSPIRALGDAPVVRPLEQVAPDHFVARHAIGGAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-101 41