Gene Information

Name : RCFBP_11838 (RCFBP_11838)
Accession : YP_003745740.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase sdr
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : 1.-.-.-
Position : 1878814 - 1879560 bp
Length : 747 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
ATGAGCAACAATATCGAAGGAAAAGTGGTCGTTATTACCGGTGCCAGCAGTGGCCTTGGTGAGGCGACAGCCCGTCACCT
TAGCGCGCAAGGCGCAATGGTGGCACTGGGTGCACGCCGGGTAGACCGCATCCAGGCACTTGCCGATGAATTGAATCGCA
ACGGCGGCAAGGCCATTGCGTGTGCAACGGATGTAACCCGCCATGAAGACGTCAAGGCTCTGGTTGATGCCGCCGTGCAG
GCTTTTGGGCGCGTTGACGTCATGATCAACAACGCGGGACTGATGCCGCACTCGCCGCTTGAACGTTTGAAAATCGAGGA
CTGGAATCAGACCATCGATGTCAACATCAAGGGCGTGCTTTATGGCATTGCGGCGGCGCTTCCACATATGAAGCGGCAAA
AGAGCGGCCATATCATCAACGTGTCTTCCGTGGCCGGGAGAACTGTTCGACCCGGTAGTGCGGTGTATGCCGCCACCAAA
AGTGCGGTATTGATGATTTCCGAGGGCCTGCGGCAGGAAGTCAAGTCGTATGACATCCGTACGACTGTCGTCTCACCGGG
CGCAATTGCAACTGAACTACCGAACAGCATTACCGAACCAGACGTCGCCGGGGCGATCGGCAAATTCTATGACCAGTTTG
CAATTCCGGCTGAGTCCTTTGCGCGCGTTGTCGCGTTTGCCATCGGCCAACCGCCGGAAGTGGATGTCAACGAAGTTTTA
TTCCGCCCTACTCGCCAGGAAGGTTGA

Protein sequence :
MSNNIEGKVVVITGASSGLGEATARHLSAQGAMVALGARRVDRIQALADELNRNGGKAIACATDVTRHEDVKALVDAAVQ
AFGRVDVMINNAGLMPHSPLERLKIEDWNQTIDVNIKGVLYGIAAALPHMKRQKSGHIINVSSVAGRTVRPGSAVYAATK
SAVLMISEGLRQEVKSYDIRTTVVSPGAIATELPNSITEPDVAGAIGKFYDQFAIPAESFARVVAFAIGQPPEVDVNEVL
FRPTRQEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 1e-48 49
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 3e-43 47