Gene Information

Name : RCFBP_10016 (RCFBP_10016)
Accession : YP_003743988.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 19841 - 20107 bp
Length : 267 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin

DNA sequence :
ATGAAGAAGTCAAGATTCACAAACAGCCAGATCATCGAAGCGCTCAAGCGCGTGGAAGCCGGTCTGGCCGTCCCGGAGCT
GTGCCGGGAATTGGGCATCAGCACCGCCACGTTCTACAAATGGCGCTCGAAGTACGGCGGCATGGATGTCTCGCTGATGG
CGCGGATGAAAGAGCTCGAGGCCGAGAACGCGCGTCTGCGCAAGATGTACGTTGAAGAGAAGCTCAAGGCCGAGATCGTT
GCGGAGGCGTTCGAAAAAACGTGGTGA

Protein sequence :
MKKSRFTNSQIIEALKRVEAGLAVPELCRELGISTATFYKWRSKYGGMDVSLMARMKELEAENARLRKMYVEEKLKAEIV
AEAFEKTW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-16 52
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-16 52
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 4e-16 52
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 4e-16 50
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-14 48
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 7e-15 48
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-17 46