|
Name : ureC (RCFBP_11356) Accession : YP_003745274.1 Strain : Ralstonia solanacearum CFBP2957 Genome accession: NC_014307 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 1389821 - 1391539 bp Length : 1719 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14663072, 2211515, 8550495; Product type e : enzyme DNA sequence : ATGACACTCAAGATCACCCGCCGCGCCTACGCGGAGATGTTCGGCCCGACCACCGGCGACCGCGTCCGCCTGGCCGATAC CAACCTCATCGTCGAAGTCGAGCGCGATTACACGCTCTACGGCGAGGAGGTGAAATTCGGCGGCGGCAAGGTCATCCGCG ACGGCATGGGCCAGAGCCAGCGCGAATCGAAGGACTGCGCCGACACCGTCATCACCAACGCGCTGATCATCGACCACTGG GGCATCGTCAAGGCCGACATCGGCCTCAAGCACGGTCGCATCGCCGCCATCGGCAAGGCGGGCAACCCGGATATCCAGCC GGGCGTGACCATCGTCATCGGGCCGGGCACCGAGATCATCGCGGGCGAGGGCATGATCGTCACCGCGGGCGGGGTCGATA CGCACATCCACTTCATCTGCCCGCAGCAGATTGACGAGGCGCTCAATAGCGGCGTGACGACCATGATTGGCGGCGGCACG GGGCCGGCCACCGGCACGTATGCCACCACCTGCACGCCGGGGCCGTGGTACATGCAGCGCATGCTGCAGGCGGTCGATGC CTACCCGATGAACATCGGCTTTCTCGGCAAGGGCAACGGCAGCCTGCCGGGCGCGCTGCGCGAGCAGATCGACGCCGGCG CCATCGGCCTGAAGCTGCACGAAGACTGGGGCTCCACGCCTGCCGCGATCGACTGTGCCTTAAGCGTGGCGGACGACACC GACACGCAGGTCGCCATCCACACCGACACGCTCAACGAGTCGGGCTTTGTCGAGGCGACTGTCGCCGCGTTCAAGGGCCG CACCATCCATACGTACCACACTGAGGGGGCCGGAGGCGGCCATGCGCCGGACATCATCCGCGTGTGCGGCGAGTCCAACG TGCTGCCCTCGTCGACCAATCCGACGCGGCCGTTCACCGTCAACACGCTGGACGAGCACCTCGACATGCTGATGGTGTGC CATCACCTGGACGCCTCCATCGTCGAGGACATCGCCTTCGCCGAGAGCCGCATCCGCCGCGAGACCATCGCCGCCGAAGA CATCCTGCACGACCTGGGCGCGTTCTCGATGATCTCGAGCGACTCGCAGGCCATGGGCCGCGTCGGCGAGGTGATCCTGC GCACGTGGCAGACCGCGCACAAGATGAAGGTGCAGCGCGGCAAGCTGGCCGGCGATCCGAACGATGCGCGCGGCGGCCAC GACAATTTTCGCGTCAAGCGCTATGTCGCCAAGTACACGATCAACCCCGCCATCACGCACGGCATCGCGCACGAGGTCGG CTCGATCGAGGTCGGCAAGTGGGCGGACCTGGTGCTGTGGAAGCCGGCTTTCTTCGGCGTCAAGCCGAGCCTGATCCTCA AGGGCGGCATGATTGCCTCGGCGGCGATGGGCGATGCCAACGCGTCGATCCCGACGCCGCAGCCGGTGCACTACCGGCCG ATGTTCGCGGCGGCGGGCGGGGCGCTGGCGCGGTCGTCGCTGAGCTTCCTTTCGCAGTCGGCGGCGCAGGCCGGCGTGGC GGATGGCTACGGCCTGGCCAAGACGACCGCCGTCGTCAAGGGCACGCGCGCGGTCACCAAGGCGCAGATGATCCACAATG ACTGGCAGCCCAGCATCACGGTCGACCCCGAAACCTACCAGGTCGTCGCCGACGGCACGCTGCTGACCTGCGAGCCGGCC GAGGTGCTGCCGATGGCGCAGCGCTATTTCCTGTTCTGA Protein sequence : MTLKITRRAYAEMFGPTTGDRVRLADTNLIVEVERDYTLYGEEVKFGGGKVIRDGMGQSQRESKDCADTVITNALIIDHW GIVKADIGLKHGRIAAIGKAGNPDIQPGVTIVIGPGTEIIAGEGMIVTAGGVDTHIHFICPQQIDEALNSGVTTMIGGGT GPATGTYATTCTPGPWYMQRMLQAVDAYPMNIGFLGKGNGSLPGALREQIDAGAIGLKLHEDWGSTPAAIDCALSVADDT DTQVAIHTDTLNESGFVEATVAAFKGRTIHTYHTEGAGGGHAPDIIRVCGESNVLPSSTNPTRPFTVNTLDEHLDMLMVC HHLDASIVEDIAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVILRTWQTAHKMKVQRGKLAGDPNDARGGH DNFRVKRYVAKYTINPAITHGIAHEVGSIEVGKWADLVLWKPAFFGVKPSLILKGGMIASAAMGDANASIPTPQPVHYRP MFAAAGGALARSSLSFLSQSAAQAGVADGYGLAKTTAVVKGTRAVTKAQMIHNDWQPSITVDPETYQVVADGTLLTCEPA EVLPMAQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 0.0 | 74 |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 0.0 | 74 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-156 | 62 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-157 | 62 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 1e-157 | 62 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-157 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | YP_003745274.1 | urease subunit alpha | VFG0270 | Protein | 3e-151 | 64 |
