Gene Information

Name : lcrS (RCFBP_11107)
Accession : YP_003745036.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1144570 - 1144836 bp
Length : 267 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
ATGAAGACGAGCAAATTCACCGAGGCGCAGATCGCGTTCGTGCTCAAGCAAGCGGAGCTGGGTACGAAGGTCGAGGAGGT
GTGCCGCAAGCTGGGCATCAGCGAAGCGACGTTCTACAACTGGAAGAAGACGTACGGGGGCGTCGGGCCATCGGAGCTGC
GCAGAATGCGGCAGCTCGAGGAAGAGAACGCGAAGCTTAAGCGGCTGGTGGCGGACCTGAGCCTGGACAAGGCCATGCTG
CAGGACGTGCTGTCAAAAAAGCTCTGA

Protein sequence :
MKTSKFTEAQIAFVLKQAELGTKVEEVCRKLGISEATFYNWKKTYGGVGPSELRRMRQLEEENAKLKRLVADLSLDKAML
QDVLSKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-27 73
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 4e-27 73
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 2e-18 49
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 4e-14 46
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 4e-14 46
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 9e-14 45
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 9e-14 45