Gene Information

Name : qseB (EbC_00080)
Accession : YP_003739399.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 10408 - 11070 bp
Length : 663 bp
Strand : -
Note : silverDB:661Eb00010

DNA sequence : 
ATGCGCATCTTAGTCATTGAGGACGATCGGTTAATTGGCGACGGGATTAAAGCCGGGCTGATAAAAATGGGATTCAGCGT
CGACTGGTTCACCGAAGGTAAAGAGGGACTGGCGGCACTCAGCGCGGCGCCTTATGACGCGGTGGTGCTGGATTTAAGCC
TGCCGGGCATGGACGGGCTGGATATTTTGCGCCAGTGGCGTCAGCAGGGACAGGATGAACCGGTGCTGATCCTCACCGCG
CGGGATGCGCTGGAACAGCGGGTAACCGGCCTACAGCAAGGGGCCGATGACTATCTCTGCAAACCTTTCGCCCTGAGCGA
AGTCGCGGCCCGGTTACAGGCGTTGATTCGCCGCCGCCATGGCCAGCTTCACCCGCTGCTCAGCCATGGTGCAGTGGTGA
TGGAGAGCGGCTCGCACCGCGTGACGCTGAACGGCGAACCGCTGGAGCTAAAATCCCGCGAGCTGGCGCTGCTCGAACTG
TTTCTAATGAATACCGGCAGAGTGCTGACCCGAGCGCAGTTAGAAGAAAAGCTCTACAGCTGGGATGAAGACGTCTCCAG
CAACGCCGTTGAAGTGCATATCCACCATCTGCGAAAAAAACTGGGCAGCCAGTTTATCCGCACCATTCACGGCGTCGGCT
ATACGCTGGGAGAACCGGTGTGA

Protein sequence : 
MRILVIEDDRLIGDGIKAGLIKMGFSVDWFTEGKEGLAALSAAPYDAVVLDLSLPGMDGLDILRQWRQQGQDEPVLILTA
RDALEQRVTGLQQGADDYLCKPFALSEVAARLQALIRRRHGQLHPLLSHGAVVMESGSHRVTLNGEPLELKSRELALLEL
FLMNTGRVLTRAQLEEKLYSWDEDVSSNAVEVHIHHLRKKLGSQFIRTIHGVGYTLGEPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-40 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003739399.1 two-component system response regulator BAC0487 Protein 4e-41 43
qseB YP_003739399.1 two-component system response regulator BAC0638 Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003739399.1 two-component system response regulator VFG0473 Protein 6e-39 43