Gene Information

Name : EbC_44590 (EbC_44590)
Accession : YP_003743837.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 4945226 - 4946401 bp
Length : 1176 bp
Strand : -
Note : silverDB:661Eb05855

DNA sequence : 
ATGCCACTAACTGACATACAAATTCGGCGCGCAAAGCCGCTAGACAAGCCTTACACCATGAACGATGGGCAAGGCTTAGC
CCTCCTGATCAATCCCGATGGAAGCAAAGGGTGGAGATTCCGTTACCGGTATGCAGGCAAGGCTCGCCTGATGTCCTTTG
GTTCTTACAGTCTCGTATCACTTGCAGAGGCGCGTGAGAAACGCGATACAGCGCGCAAGCAGGTAGCGAATGGAATAGAC
CCGGTAGAGGAGCGGAAAGCTCAGAAACTGGCGCAGCAGCTTTCCAGCGAAAACTCTTTTGAAGCTATTAGCAAGGAGTG
GCATGCTAACAAAGCTGATCGTTGGACATTGGCTTATAGAGAAGAGATCCTCAAAACCTTTGAACAGGACGTTTACCCGT
TCATTGGCCGTCGACCTATCTCTGAAATTAAGCCACTTGAGTTGCTTGAGGTTCTGAGGCGTATTGAGAAGCGTGGTGCT
TTGGAGAAAACTAGAAAAGTACGGCAGCGCTGTGGCGAAGTTTTTCGCTATGCGATTATTACAGGCAGGGCTGAGTATAA
CCCCGCACCAGATTTAGCCAGCGCCTTGGCCGTTCCTAAACAAAAGCATCATCCATTTTTATCAGCGGAGGAATTGCCCC
ATTTTATAAGTGATCTGGAAGCTTACACTGGCAGCATCATTACAAAAAACGCCACAAAGATTGTTATGTTGACAGGGGTT
AGAACCCAAGAGATGCGCTTTGCTTCGTGGTGTGAGGTGGATCTTGTTAAAGGTGTCTGGGAGATACCTGCGGAACGGAT
GAAAATGCGAAGGCCACATATAGTGCCTTTATCTACCCAAGTAATTGATCTCTTTAAGCAGCTGAAGTTGATTACCGGAC
ATTACCCATACATTTTTATCGGTCGAAACAACCGCAGCAAACCAATATCTAAAGAAACTGTGTCACAGGTTATAGAGTTA
CTTGGCTACAAAGGGCGTGCTACCGGTCACGGTTTTAGGCACACCATGTCGACAATATTGCATGAGCAAGGCTTTGATAG
CGCTTGGATTGAGATGCAGCTGGCACATGTTGATAAAAACAATATTCGTGGAACATATAACCATGCATTATATATTAAGC
AAAGGAAAAGCATGCTTCAATGGTATTCAGATAAATTGCTCAAAGGATCAGAGTAA

Protein sequence : 
MPLTDIQIRRAKPLDKPYTMNDGQGLALLINPDGSKGWRFRYRYAGKARLMSFGSYSLVSLAEAREKRDTARKQVANGID
PVEERKAQKLAQQLSSENSFEAISKEWHANKADRWTLAYREEILKTFEQDVYPFIGRRPISEIKPLELLEVLRRIEKRGA
LEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLASALAVPKQKHHPFLSAEELPHFISDLEAYTGSIITKNATKIVMLTGV
RTQEMRFASWCEVDLVKGVWEIPAERMKMRRPHIVPLSTQVIDLFKQLKLITGHYPYIFIGRNNRSKPISKETVSQVIEL
LGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKNNIRGTYNHALYIKQRKSMLQWYSDKLLKGSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAD44730.1 Int Not tested SHI-2 Protein 4e-138 70
int CAC39282.1 integrase Not tested LPA Protein 6e-140 70
aec33 AAW51716.1 Int Not tested AGI-3 Protein 3e-140 70
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 3e-137 70
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 3e-137 70
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 2e-137 70
int AAC31482.1 CP4-like integrase Not tested LEE Protein 1e-137 68
int ACU09430.1 integrase Not tested LEE Protein 1e-137 68
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-137 68
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-137 68
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 2e-109 57
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 5e-112 55
intA AAB00935.1 integrase A Not tested vap locus Protein 2e-57 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EbC_44590 YP_003743837.1 phage integrase VFG0598 Protein 1e-137 70
EbC_44590 YP_003743837.1 phage integrase VFG0783 Protein 8e-138 68