Gene Information

Name : kdpA (EbC_43400)
Accession : YP_003743718.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2060
EC number : -
Position : 4809546 - 4811231 bp
Length : 1686 bp
Strand : -
Note : silverDB:661Eb05684

DNA sequence :
ATGGCCGCCAGCGCATTTTTACTGATCGCCAGCTATCTGCTGCTGTTGATGATCCTCGCCCGTCCGCTGGGTAGCGGTCT
TGCTCGCCTGATTGACGATCGTCCGCTGGCCGGCGTTGCCGGCTTCGAACGCCTGCTCTGGCGCGCCAGCGGCGTGGCGG
CTGAATCCATGAGCTGGCGCAGCTACTTGCTCGCTATTCTGCTGTTTAACCTCGGCGGCCTGATCCTGCTGACAGTGATG
CTGATGACCCAGGCCAGCCTGCCGCTTAACCCGCAGCACCTGCCGAATCTCAGCTGGCATCTGGCGCTGAATACCGCCGT
CAGCTTTGTCACCAACACCAACTGGCAGGCCTATGCCGGCGAAAGCACGCTCAGCTACTTTAGCCAGATGGTGGGCCTGA
CCGTGCAGAACTTCCTCTCGGCAGCGACCGGGATTGCGGTGGCCTTCGCGCTGATCCGCGGCTTTGCTAACCGCTCACTG
GGCACGCTGGGCAACGCCTGGCGGGATATGACCCGCATCACGCTGTATGTGTTGCTGCCACTTTCCCTGCTGATTGCGCT
GTTCTTTGTCAGCCAGGGTACGCTGCAAAACGTTAACGGCTATCTGGATCTCACCACGCTGGAAGGGGTGAAACAGACGC
TGCCGATGGGTCCGGTCGCCTCGCAGGAAGCGATCAAAATGCTTGGCACCAACGGCGGCGGTTTCTTTAACGCTAACTCG
GCGCATCCGTTTGAAAACCCGACCGCGTTAAGCAACGTCGTGCAGATGCTGGCGATATTCCTGATCCCGGCCGCATTGTG
CTTTGCCTTCGGCGATGTGGTGAAAGACCGCCGTCAGGGCCATGCGCTGCTGTGGGCGATGTCGCTGATGTTTATCGGCG
CGGTGGTGGTGGTGATGTGGGCCGAACTGAAAGGCAATCCGCACTTCCTCAGCCTGGGTGCCGACAGCGCTATCAATATG
GAAGGCAAAGAAACCCGCTTTGGCATTCTCAACTCCAGCCTGTTCGCGGTGATCACTACCGCCGCCTCGTGCGGCGCGGT
CAACGCGATGCATGACTCCTTTACCGCGCTCGGCGGCATGGTGCCGATGTGGCTGATGCAGATTGGCGAAGTGGTGTTTG
GCGGCGTCGGTGCCGGGCTGTACGGCATGCTGCTGTTTGTCCTGCTGGCGGTGTTTATCGCCGGCCTGATGATCGGTCGC
ACCCCGGAGTACCTCGGCAAAAAAATCGACGTCTGGGAAATGAAAATGACCGCGCTGGCGATCCTGATCACGCCGACGCT
GGTTCTGCTCGGCACCGCGCTGGCGATGATGACCGACGCCGGACGCAGCGGTATGGCCAACCCCGGTATTCACGGCTTCA
GCGAAGTGCTGTATGCGGTGTCGTCGGCCGCGAACAACAACGGCAGTGCCTTTGCCGGCCTGAGCGCCAATACCCCGTTC
TGGAACCTGCTGCTGGCGTTCTGCATGCTGGTCGGCCGCTTTGGCATCATCATTCCGGTGATGGCGATTGCCGGATCGCT
GGCGATGAAAAAAGTGCAGCCGGTGGGCAACGGCACGCTGCCGACCCACGGGGTGCTGTTTATCGCTCTGCTGATTGGCA
CGGTGCTGCTGGTGGGCGCACTGACGTTTATCCCTGCTCTGGCTCTGGGGCCAGTGGCGGAACACCTGATCATGTTTGCA
CATTAA

Protein sequence :
MAASAFLLIASYLLLLMILARPLGSGLARLIDDRPLAGVAGFERLLWRASGVAAESMSWRSYLLAILLFNLGGLILLTVM
LMTQASLPLNPQHLPNLSWHLALNTAVSFVTNTNWQAYAGESTLSYFSQMVGLTVQNFLSAATGIAVAFALIRGFANRSL
GTLGNAWRDMTRITLYVLLPLSLLIALFFVSQGTLQNVNGYLDLTTLEGVKQTLPMGPVASQEAIKMLGTNGGGFFNANS
AHPFENPTALSNVVQMLAIFLIPAALCFAFGDVVKDRRQGHALLWAMSLMFIGAVVVVMWAELKGNPHFLSLGADSAINM
EGKETRFGILNSSLFAVITTAASCGAVNAMHDSFTALGGMVPMWLMQIGEVVFGGVGAGLYGMLLFVLLAVFIAGLMIGR
TPEYLGKKIDVWEMKMTALAILITPTLVLLGTALAMMTDAGRSGMANPGIHGFSEVLYAVSSAANNNGSAFAGLSANTPF
WNLLLAFCMLVGRFGIIIPVMAIAGSLAMKKVQPVGNGTLPTHGVLFIALLIGTVLLVGALTFIPALALGPVAEHLIMFA
H

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 7e-84 52
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 5e-84 52
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-76 48
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 8e-78 48
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 2e-76 48
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-76 48
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-76 48
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-76 48