Gene Information

Name : EbC_43220 (EbC_43220)
Accession : YP_003743700.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 4787126 - 4787458 bp
Length : 333 bp
Strand : -
Note : silverDB:661Eb05658

DNA sequence : 
GTGAAAGGCGAAATCGTAGAAATTATCATCGACTGGATTGAAGAGCATCTGGATGATGGTCTGAATATTGAAGCCGTAGC
CGCCCGTTCGGGCTATTCAAAATGGCACCTGCAACGTGCATTTAAAGAGCAACAGGGCATGACTTTAGGCACCTTTATCC
GCTGCCGTCGACTGGACGAAGCGGCCAAAAGCCTGATCAGTTCCCACAAGACCATTATGACCATCTCGATGGATCTGGGA
TTTTCTTCCCAGCAGTGTTTCCAGCGGGTGTTCAAAAAGCATTTTAATATCACGCCAAGAGACTATCGCAACCAGCATCG
TGAAATGCACTGA

Protein sequence : 
MKGEIVEIIIDWIEEHLDDGLNIEAVAARSGYSKWHLQRAFKEQQGMTLGTFIRCRRLDEAAKSLISSHKTIMTISMDLG
FSSQQCFQRVFKKHFNITPRDYRNQHREMH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 2e-19 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EbC_43220 YP_003743700.1 DNA-binding transcriptional regulator CP001918.1.gene327.p Protein 5e-21 55
EbC_43220 YP_003743700.1 DNA-binding transcriptional regulator CP000647.1.gene4499. Protein 9e-21 54
EbC_43220 YP_003743700.1 DNA-binding transcriptional regulator NC_002695.1.914293.p Protein 3e-20 53
EbC_43220 YP_003743700.1 DNA-binding transcriptional regulator CP000034.1.gene4505. Protein 3e-20 53
EbC_43220 YP_003743700.1 DNA-binding transcriptional regulator CP001138.1.gene4488. Protein 5e-20 53
EbC_43220 YP_003743700.1 DNA-binding transcriptional regulator BAC0371 Protein 3e-20 53
EbC_43220 YP_003743700.1 DNA-binding transcriptional regulator CP000647.1.gene1624. Protein 3e-19 47
EbC_43220 YP_003743700.1 DNA-binding transcriptional regulator CP001138.1.gene612.p Protein 5e-17 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EbC_43220 YP_003743700.1 DNA-binding transcriptional regulator VFG0585 Protein 5e-20 53