Gene Information

Name : EbC_04060 (EbC_04060)
Accession : YP_003739797.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 482119 - 483666 bp
Length : 1548 bp
Strand : +
Note : silverDB:661Eb00535

DNA sequence :
ATGCTGATGTCAGTTCACAATGAAACCGCCTCTGCCGGCACCACCACCGTGCTGGATCGCCCCGTTGCGGGCGGCGTTTA
TGCCTCACTGTTTGAAAAAATCAATCTCAGCCCGGTCACGCACCTCAGCGACCTGAATATCTGGCAGGACAACCAGGCGA
TGTCCGATGCCAGCGTCAACGAACGCGTCACCGCGGCGATGAAGGTGCTGGTTGAGTGCCTGAATCAGTCAGGGTCAACG
GTTGAAAAGCTCGACAAGACCCTGCTGGACCACCATATCGCCCGGCTGGACGGGCAGATCAGCCGTCAGCTCGATGCGGT
AATGCACCATGACGCGTTCCAGCAGGTGGAATCCCTGTGGCGCGGCCTGAAGTCGCTGGTCGATAAAACCGACTTCCGTC
AGAACGTGAAGATCGACGTGCTGGACCTGTCGAAAGCCGACCTGCTGCAGGACTTTGAAGACGCGCCGGAAATCATCCAG
AGCGGGCTGTACGCACACACCTATATTGCCGAATACGACACTCCCGGCGGCGAGCCGATTGGCGCACTGATCTCCTCCTA
CGAGTTCGACGCCTCGGCGCAGGACGTGGCGCTGCTGCGCAATATCTCTAAAGTCGCGGCTTCCGCGCATATGCCCTTTA
TCGGCTCCGCCGGCCCGCAGTTCTTCCTGAAGGACAATATGGAAGACGTGGCGGCAATCAAAGATATCGGCAACTACTTC
GACCGCGCCGAATACATCAAGTGGAAGGCGTTCCGCGAAACCGACGACGCGCGCTATATCGGCCTGGTGATGCCGCGCGT
GCTCGGCCGCCTGCCGTACGGCCCGGACACCGTGCCGGTGCGCAGCTTTAACTACGTTGAAGAGGTGAAAGGCCCGGACC
ACGACAAATACCTGTGGACCAATGCCTCGTTCGCCTTTGCCGCCAACATGGTGAAAAGCTTTATCAACAACGGCTGGTGC
GTGCAGATCCGCGGTCCGCAGGCCGGTGGCGCCGTCCAGGATCTGCCGATCCATCTGTACGACCTCGGCACCGGCAATCA
GGTGAAAATCCCGTCTGAGGTGATGATCCCGGAAACCCGCGAGTTTGAGTTCGCTAACCTCGGCTTTATCCCGCTGTCGT
ATTACAAAAACCGCGACTACTCGTGCTTCTTCTCCGCCAACTCGACGCAGAAACCGGCGCTGTACGACACCGCAGACGCC
ACCGCCAACAGCCGCATCAACTCGCGCCTGCCATACATCTTCCTGCTGTCGCGCATTGCACACTATCTGAAGCTGATTCA
GCGCGAAAACATCGGCACCACCAAGGATCGCCGCCTGCTGGAGCTGGAGCTGAACACCTGGGTGCGCGGGCTGGTCACGG
AAATGACCGATCCGGGCGACGAGTTGCAGGCCTCCCACCCGCTGCGCGATGCCAAAGTGATTGTCGAAGATATCGAAGAC
AACCCGGGCTTCTTCCGCGTCAGGCTGTTCGCCATCCCACATTTCCAGGTGGAAGGCATGGACGTCAACCTGTCTCTAGT
TTCCCAGATGCCGAAGGCGAAAGCGTAA

Protein sequence :
MLMSVHNETASAGTTTVLDRPVAGGVYASLFEKINLSPVTHLSDLNIWQDNQAMSDASVNERVTAAMKVLVECLNQSGST
VEKLDKTLLDHHIARLDGQISRQLDAVMHHDAFQQVESLWRGLKSLVDKTDFRQNVKIDVLDLSKADLLQDFEDAPEIIQ
SGLYAHTYIAEYDTPGGEPIGALISSYEFDASAQDVALLRNISKVAASAHMPFIGSAGPQFFLKDNMEDVAAIKDIGNYF
DRAEYIKWKAFRETDDARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFAFAANMVKSFINNGWC
VQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSTQKPALYDTADA
TANSRINSRLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNTWVRGLVTEMTDPGDELQASHPLRDAKVIVEDIED
NPGFFRVRLFAIPHFQVEGMDVNLSLVSQMPKAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-101 42
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-101 42
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 1e-97 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EbC_04060 YP_003739797.1 hypothetical protein VFG2475 Protein 7e-112 45
EbC_04060 YP_003739797.1 hypothetical protein VFG2093 Protein 2e-108 43
EbC_04060 YP_003739797.1 hypothetical protein VFG2070 Protein 3e-88 41