Gene Information

Name : pagC (EbC_37210)
Accession : YP_003743099.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Virulence
Product : virulence membrane protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3637
EC number : -
Position : 4136567 - 4137130 bp
Length : 564 bp
Strand : -
Note : silverDB:661Eb04867

DNA sequence : 
ATGAAAACAACGATTATCTCTCTGGCTATTTTAACTGCCATTAGTACCGCGACTGTTGTGCACGCCGCAGCCCACACCAT
CACCCTGGGATATGCGCAAAGCAAAGTACAGGATTTTAAAAACATCCAGGGGGTTAATGCGAAATATCGCTACGAGTGGA
ACTCTCCTCTCAGTATCATAACCTCATTTACCTATTGGAATGGCAGTAATGACGGTCATTATTCAAACGTCAATAATACT
ATCTATCCAGAAGTTGATGTAAAGTATTATTCTTTAGCCGTCGGTCCGGCATATCGTATCAATGACTTTTTCAGTCTCTA
TGGTTTAGTTGGCGTGAACTATAACAAAGTTAATTACAGCTATGACTTGGAAAAATTTGGCCTGGGAAATTCAAGCAGTA
CGAGTGACAATAAATCTACCAACCTGATGTATGGCGCGGGTGTGCAAATCAACCCATGGAATAATCTCACCATCGACGTG
GGTTATGAGGGTTCAAGAGTCACAGACGGCGTTACGGACTACGCAGTGAATGGATTTAATGTGGGTGTTGGCTACCGCTT
TTAA

Protein sequence : 
MKTTIISLAILTAISTATVVHAAAHTITLGYAQSKVQDFKNIQGVNAKYRYEWNSPLSIITSFTYWNGSNDGHYSNVNNT
IYPEVDVKYYSLAVGPAYRINDFFSLYGLVGVNYNKVNYSYDLEKFGLGNSSSTSDNKSTNLMYGAGVQINPWNNLTIDV
GYEGSRVTDGVTDYAVNGFNVGVGYRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 9e-23 50
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 2e-26 49
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 4e-27 49
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 2e-27 49
pagC AGI37340.1 PagC Virulence OI-122 Protein 2e-20 45
pagC AGI37347.1 PagC Virulence OI-122 Protein 2e-20 45
pagC AGI37352.1 PagC Virulence OI-122 Protein 1e-19 44
pagC AGI37348.1 PagC Virulence OI-122 Protein 3e-21 44
pagC AGI37337.1 PagC Virulence OI-122 Protein 1e-19 44
pagC AGI37342.1 PagC Virulence OI-122 Protein 1e-19 44
pagC AGI37344.1 PagC Virulence OI-122 Protein 1e-19 44
pagC AGI37346.1 PagC Virulence OI-122 Protein 1e-19 44
pagC AGI37350.1 PagC Virulence OI-122 Protein 1e-19 44
pagC AGI37341.1 PagC Virulence OI-122 Protein 1e-19 44
pagC AGI37349.1 PagC Virulence OI-122 Protein 1e-19 44
pagC AGI37351.1 PagC Virulence OI-122 Protein 4e-21 44
pagC AGI37343.1 PagC Virulence OI-122 Protein 2e-19 43
pagC AGI37353.1 PagC Virulence OI-122 Protein 2e-19 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pagC YP_003743099.1 virulence membrane protein VFG0442 Protein 2e-19 41