Gene Information

Name : trp1400B (EbC_36980)
Accession : YP_003743076.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Unknown
Product : IS1400 transposase B
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4114991 - 4115821 bp
Length : 831 bp
Strand : -
Note : silverDB:661Eb04842

DNA sequence :
ATGCCGTGCACTGAAAGATGTCATCGAAAAAAAGCTTTAAAACCAGCGATAAAGCGTGAGCTCGTCAACTATCTGACCGC
GCAGTTTACGATGAGCATACGCCAGGCATGCAGGACGTTATCGCTGAGCAGGACGGTGTATTGTTACCAGCCCGGTACCC
GGCGTGATGAAGCGGTGATCCAGGTGCTGACCGGGTTGGCAGAGCGCTATCCCCGCTACGGCTTTAAGAAGCTTTTTCAG
GTGCTGCGCAGGCAGGGGCACGTCTGGAACAACAAGCGCGTACACCGGATTTACTGTCTGCTGAAACTGAATTTTCGACG
CAATGGTAAGCAACGTCTTACGGTGCGCAATCCGGCTCCGCTGGCAACGCCGGAAGCGCTCAATCAGAGCTGGTCTATCG
ATTTTATGCACAACGCGCTGGTCTGTGGTCGGCGTTTTCGGACCTTCAACGTGGTGGATGATTTTAACCGCGAGGCCCTT
GCGATAGAAATCGATCTGAATATTCCTGCGCAACGAATGGTGCGGGTTCTGGACAGGATAGTGGCGAATCGCGGATATCC
GCTGAAGATGCGGATGGATAACGGCCCGGAACTGATATCACTGGCTCTGGCGCAATGGGCTGAAGACCATGGTGTGATGC
TGGAATTTATCAAGCCGGGTAAGCCGACACAGAACGCGTTTATTGAGAGGTTTAACAGGACGTACCGGACAGAAATACTG
GACTTTTACCTGTTCAGAACGCTGAACGAAGCACGGGAAATCACAGAGCGCTGGCTGAATGAATACAACAGTGAGCGGCC
CCATGAATCCCTGAATAACCTGACACCGTAA

Protein sequence :
MPCTERCHRKKALKPAIKRELVNYLTAQFTMSIRQACRTLSLSRTVYCYQPGTRRDEAVIQVLTGLAERYPRYGFKKLFQ
VLRRQGHVWNNKRVHRIYCLLKLNFRRNGKQRLTVRNPAPLATPEALNQSWSIDFMHNALVCGRRFRTFNVVDDFNREAL
AIEIDLNIPAQRMVRVLDRIVANRGYPLKMRMDNGPELISLALAQWAEDHGVMLEFIKPGKPTQNAFIERFNRTYRTEIL
DFYLFRTLNEAREITERWLNEYNSERPHESLNNLTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-120 93
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 5e-41 41