Gene Information

Name : xerD (EbC_36280)
Accession : YP_003743006.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Unknown
Product : tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4045312 - 4046205 bp
Length : 894 bp
Strand : -
Note : silverDB:661Eb04751

DNA sequence :
GTGCAGGACAGCGATCTGATTGAGCAATTTCTGGATGCCTTGTGGATAGAGCGCAATCTGGCTGAGAATACCGTGGCGTC
TTACCGGCTGGATTTACTGTCTCTGGCGGGGTGGCTACAGCACAATGAATCAAATTTGCTGCGAGTCGATGCCGTCGATT
TGCAGGGCTTCCTCGCGGAAAGAGTGGAGGGCGGTTATAAAGCCACCAGTTCGGCTCGCCTCTTGAGCGCCATGCGCCGG
CTGTTTCAGTATCTCTATCGTGAGAAACTGCGCGAAGACGATCCCAGCGCGCTGCTGGCTTCCCCTAAACTCCCTCAGCG
TTTGCCGAAAGACCTGAGCGAAGCACAAATTGACCGGCTGTTGCAGGCGCCAAGCGTTGAACAGCCGATTGAGCTGCGCG
ATAAAGCCATGCTGGAACTGCTGTATGCCACCGGCTTGCGCGTGACGGAACTGGTGAGCCTGACGCTTAACAACGTCAGC
CTGCGGCAGGGCGTAGTGCGGGTGATTGGCAAGGGTGACAAAGAACGGCTGGTGCCGCTGGGCGAAGAAGCGGTGCACTG
GATTGAGCAATATCTGGAGTACGGCAGGCCCTGGCTACTGAACGGCCAGACGCTGGATGTGCTGTTCCCCAGCAGCCGCG
CGCAGCAGATGACGCGGCAAACTTTCTGGCATCGCATTAAACATTACGCCACACTGGCAGGGATCGACAGCGCGAAGCTT
TCGCCTCACGTATTGCGCCATGCTTTTGCCACGCATCTGCTGAACCACGGGGCGGATCTGCGCGTCGTGCAGATGCTTTT
GGGGCACAGCGATCTCTCCACTACCCAAATTTATACGCATGTTGCCACCGAGCGGCTGCGTCAGTTACATCAACAGCATC
ATCCGCGGGCCTGA

Protein sequence :
MQDSDLIEQFLDALWIERNLAENTVASYRLDLLSLAGWLQHNESNLLRVDAVDLQGFLAERVEGGYKATSSARLLSAMRR
LFQYLYREKLREDDPSALLASPKLPQRLPKDLSEAQIDRLLQAPSVEQPIELRDKAMLELLYATGLRVTELVSLTLNNVS
LRQGVVRVIGKGDKERLVPLGEEAVHWIEQYLEYGRPWLLNGQTLDVLFPSSRAQQMTRQTFWHRIKHYATLAGIDSAKL
SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-60 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-60 56