Gene Information

Name : nrdE (EbC_34420)
Accession : YP_003742820.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : -
Position : 3821130 - 3823238 bp
Length : 2109 bp
Strand : +
Note : silverDB:661Eb04495

DNA sequence :
GTGCTGGATTATCACTCGCTGAATGCGATGCTCAATCTGTACGATGCCGACGGCAACATTCAGTTTGAGAAAGATAAAGA
AGCCACGCGTCAGTATTACCTGCAACATGTTCTGCCGAACACCGTGAAATTTGATTCCGTTGGTGAGCGCTTACAGTACC
TGGTTTCAGAGGGCTACTACGAAGCCGACGTGCTGAATGCTTATCCGTTTGAATTTGTCAGTTCGCTTTTTGAACAGGCG
TATCAACGCCGTTTCCGCTTCCAGACCTTCCTTGGCGCGTGGAAGTTTTATACCAGCTACACGCTGAAGACCTTTGATGG
TAAACGCTATCTGGAAGGCTTTACCGAGCGCGTCTGCATGGTGGCGTTGACGCTGGCCAAAGGCGATCGGTCGCTGGCCT
TATCGCTGATGGAAGAGATGCTGTCTGGTCGTTTCCAGCCGGCCACGCCGACCTTCCTCAATTGTGGAAAACAGCAGCGA
GGCGAGCTGGTTTCCTGCTTCCTGCTGCGTATTGAAGACAATATGGAGTCAATTGGCCGCTCGGTGAACTCCGCTTTACA
GCTCTCCAAGCGCGGTGGCGGCGTCGCTTTTCTGCTTTCCAACCTGCGTGAATCGGGTGCGCCAATAAAGCGTATCGAAA
ACCAGTCATCGGGCGTGATCCCGGTGATGAAAATGCTGGAAGACGCCTTCTCTTACGCCAATCAGCTTGGCGCGCGTCAG
GGTGCAGGTGCGGTCTATCTGCATGCTCATCATCCGGATATCCTGCGCTTTTTGGATACCAAGCGCGAAAACGCCGACGA
AAAAATCCGTATCAAGACGCTGTCGCTGGGCGTGGTGATTCCCGATATCACTTTCCAGCTGGCCAAGACTAACCAGCAGA
TGGCGCTGTTTTCGCCGTATGACGTTGAGCGTATTTACGGCCTGCCGTTCGCAGATATCAGCATCAGCGAAAAATACGAA
GAGATGTTGGCGGACGACCGTATCACCCGCACCTTTATCAATCCGCGTGAATTCTTCCAGACGCTGGCGGAAATCCAGTT
CGAATCCGGCTATCCGTACATCATGTTCGAAGACACGGTAAACCGTGCGAACCCGATTAAAGGCCGGATTAACATGAGCA
ACCTCTGCTCTGAGATCCTGCAGGTGAACACGCCAACCGAATACAATGATGACCTCAGCTATCGCCGTATCGGTAAGGAT
ATCTCCTGTAATCTTGGCTCACTGAATATTGCTCACACGATGGATTCGCCAGATTTTTCACGCACGGTGGAAATTGCGGT
GCGGGGTCTGACGGCGGTGTCCGATCAAAGCCATATCCATTCGGTTCCTTCCATTGAACGTGGCAATGCCCAGTCGCACG
CCATTGGTCTGGGGCAAATGAACCTGCACGGCTATCTGGCACGCGAAGGCATTCAATATGGCTCTGAGGTGGCGCTGGAC
TTCACCAACCTCTATTTCTATACCATCACCTATCACGCCCTGCGCACCTCTAACCTGATGGCTCAGGAGCGCGGAGAGCG
CTTTGCCGGTTTCGAAGAATCGCGTTACGCCAGCGGTGAATACTTCGCTCAGTACGTTGAGCAACGCTGGCAGCCACGTA
CACCAGAAGTCGCCGCGCTGTTTGCCCGCGCGGGAATTACCTTACCGGGCCAGAAAGAGTGGCGGGAACTGCGTGAAGCG
GTGATGAAGCACGGGATCTACAACCAGAATCTTCAGGCGATCCCACCGACGGGTTCTATCTCCTATATCAATCATGCGAC
GTCGAGCATTCACCCGATCGTGTCGAGGATTGAAATCCGTAAAGAAGGTAAAACTGGCCGCGTGTATTACCCGGCACCGT
TTATGAATAACGACAATCAGGCGTTCTACCGGGATGCCTATGATATCGGTCCCGAAGCGATTATTGACACCTATGCCGAG
GCCACGCGCCATGTCGATCAGGGGCTTTCTCTGACGCTTTTCTTCCGCGATACCGCCACCACGCGCGATATCAACAAGGC
GCAGATTTACGCCTGGAAGAAAGGCATTAAAACGCTTTATTACATTCGCCTGCGTCAGATGGCCCTGCTGGGCACTGAAG
TAGAAGGCTGCGTTTCCTGCTCGCTGTAA

Protein sequence :
MLDYHSLNAMLNLYDADGNIQFEKDKEATRQYYLQHVLPNTVKFDSVGERLQYLVSEGYYEADVLNAYPFEFVSSLFEQA
YQRRFRFQTFLGAWKFYTSYTLKTFDGKRYLEGFTERVCMVALTLAKGDRSLALSLMEEMLSGRFQPATPTFLNCGKQQR
GELVSCFLLRIEDNMESIGRSVNSALQLSKRGGGVAFLLSNLRESGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQ
GAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKTNQQMALFSPYDVERIYGLPFADISISEKYE
EMLADDRITRTFINPREFFQTLAEIQFESGYPYIMFEDTVNRANPIKGRINMSNLCSEILQVNTPTEYNDDLSYRRIGKD
ISCNLGSLNIAHTMDSPDFSRTVEIAVRGLTAVSDQSHIHSVPSIERGNAQSHAIGLGQMNLHGYLAREGIQYGSEVALD
FTNLYFYTITYHALRTSNLMAQERGERFAGFEESRYASGEYFAQYVEQRWQPRTPEVAALFARAGITLPGQKEWRELREA
VMKHGIYNQNLQAIPPTGSISYINHATSSIHPIVSRIEIRKEGKTGRVYYPAPFMNNDNQAFYRDAYDIGPEAIIDTYAE
ATRHVDQGLSLTLFFRDTATTRDINKAQIYAWKKGIKTLYYIRLRQMALLGTEVEGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 72